Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 RNU4-47P-201ENST00000410876 114 ntBASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 AL513477.1-202ENST00000417061 214 ntBASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 RN7SL330P-201ENST00000469709 307 ntBASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 RN7SL442P-201ENST00000473804 320 ntBASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 AC006483.1-201ENST00000487308 313 ntBASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 PHBP14-201ENST00000512887 367 ntBASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 RN7SKP49-201ENST00000516675 260 ntBASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 DEFB131C-201ENST00000528817 165 ntBASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 AP000942.4-201ENST00000604811 241 ntBASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 AC005562.2-201ENST00000618264 111 ntBASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 MAPK10-362ENST00000641864 4484 ntBASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
IGHV4-28A0A0C4DH34 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 RNA5SP374-201ENST00000362939 125 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 RNU6-727P-201ENST00000363592 107 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 RNU5F-3P-201ENST00000363767 117 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 Y_RNA.179-201ENST00000363844 90 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 RNU6-944P-201ENST00000364023 107 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 Y_RNA.276-201ENST00000364732 109 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 Y_RNA.439-201ENST00000384119 94 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 RNU6-1145P-201ENST00000384246 107 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 AL079342.1-201ENST00000401460 267 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 MIR1302-3-201ENST00000408128 138 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 RNA5SP229-201ENST00000410809 99 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 AC004386.2-201ENST00000441858 148 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 HMGN1P18-201ENST00000457642 277 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 AC091179.3-201ENST00000474761 144 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 AC026470.2-201ENST00000561492 181 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 MIR5004-201ENST00000579078 107 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 MIR4503-201ENST00000582187 83 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 MZT1P2-201ENST00000604387 248 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 Y_RNA.772-201ENST00000606692 102 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 AC099778.2-201ENST00000610904 211 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 AL357075.2-201ENST00000614906 189 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 AC010205.1-201ENST00000616668 449 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 MIR8057-201ENST00000620957 69 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 AC130454.1-201ENST00000622948 401 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 MTND5P35-201ENST00000557537 1720 ntBASIC2.31□□□□□ -2.04
IGHV4-28A0A0C4DH34 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 Y_RNA.19-201ENST00000362462 99 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 Y_RNA.64-201ENST00000362845 102 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 Y_RNA.105-201ENST00000363182 111 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 Y_RNA.183-201ENST00000363882 113 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 RNU6-770P-201ENST00000363929 105 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 RNU6-461P-201ENST00000364195 107 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 Y_RNA.222-201ENST00000364264 102 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 SNORD32B-201ENST00000364460 84 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 RNU6-793P-201ENST00000384233 104 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 RNU6-611P-201ENST00000384276 104 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 RNU6-713P-201ENST00000384761 107 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 Y_RNA.595-201ENST00000410403 105 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 AC004866.1-201ENST00000411748 78 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 TRIAP1P1-201ENST00000427062 225 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 ARL5AP4-201ENST00000430731 512 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 IPO7P1-201ENST00000442031 636 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 AL731563.1-201ENST00000442202 214 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 MIR449C-201ENST00000516047 92 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 Y_RNA.683-201ENST00000516508 93 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 RNU6-586P-201ENST00000517265 104 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 RRN3P3-201ENST00000549207 578 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 MIR2682-201ENST00000580305 110 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 MIR5006-201ENST00000583027 110 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 uc_338.25-201ENST00000613756 156 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 TCL6_2.1-201ENST00000615162 119 ntBASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.3□□□□□ -2.04
IGHV4-28A0A0C4DH34 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
IGHV4-28A0A0C4DH34 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
IGHV4-28A0A0C4DH34 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
IGHV4-28A0A0C4DH34 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.29□□□□□ -2.04
IGHV4-28A0A0C4DH34 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.29□□□□□ -2.04
IGHV4-28A0A0C4DH34 Y_RNA.143-201ENST00000363520 106 ntBASIC2.29□□□□□ -2.04
IGHV4-28A0A0C4DH34 SNORA18.3-201ENST00000384122 132 ntBASIC2.29□□□□□ -2.04
IGHV4-28A0A0C4DH34 MIR23A-201ENST00000385245 73 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms