Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 AL158827.2-201ENST00000602494 330 ntBASIC1.18□□□□□ -2.22
LRRC42Q9Y546 RNU6-85P-201ENST00000605989 107 ntBASIC1.18□□□□□ -2.22
LRRC42Q9Y546 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.18□□□□□ -2.22
LRRC42Q9Y546 U2.17-201ENST00000611454 95 ntBASIC1.18□□□□□ -2.22
LRRC42Q9Y546 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.18□□□□□ -2.22
LRRC42Q9Y546 AL691447.3-201ENST00000635020 330 ntBASIC1.18□□□□□ -2.22
LRRC42Q9Y546 MTND4P14-201ENST00000435799 1354 ntBASIC1.18□□□□□ -2.22
LRRC42Q9Y546 RNU6-112P-201ENST00000363599 104 ntBASIC1.17□□□□□ -2.22
LRRC42Q9Y546 SNORA25.8-201ENST00000364831 128 ntBASIC1.17□□□□□ -2.22
LRRC42Q9Y546 Y_RNA.504-201ENST00000384481 104 ntBASIC1.17□□□□□ -2.22
LRRC42Q9Y546 AL049545.1-201ENST00000401856 572 ntBASIC1.17□□□□□ -2.22
LRRC42Q9Y546 MIR1285-1-201ENST00000408593 84 ntBASIC1.17□□□□□ -2.22
LRRC42Q9Y546 AP000275.1-201ENST00000411943 390 ntBASIC1.17□□□□□ -2.22
LRRC42Q9Y546 RPL37P10-201ENST00000412884 288 ntBASIC1.17□□□□□ -2.22
LRRC42Q9Y546 CST2P1-201ENST00000425770 87 ntBASIC1.17□□□□□ -2.22
LRRC42Q9Y546 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.17□□□□□ -2.22
LRRC42Q9Y546 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.17□□□□□ -2.22
LRRC42Q9Y546 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.17□□□□□ -2.22
LRRC42Q9Y546 AC073415.1-201ENST00000449240 153 ntBASIC1.17□□□□□ -2.22
LRRC42Q9Y546 YWHAEP4-201ENST00000505390 198 ntBASIC1.17□□□□□ -2.22
LRRC42Q9Y546 CCDC34P1-201ENST00000507441 517 ntBASIC1.17□□□□□ -2.22
LRRC42Q9Y546 AC097473.1-201ENST00000508142 408 ntBASIC1.17□□□□□ -2.22
LRRC42Q9Y546 EIF4A1P12-201ENST00000551910 141 ntBASIC1.17□□□□□ -2.22
LRRC42Q9Y546 CYP4A27P-201ENST00000567218 190 ntBASIC1.17□□□□□ -2.22
LRRC42Q9Y546 MIR4528-201ENST00000577763 90 ntBASIC1.17□□□□□ -2.22
LRRC42Q9Y546 MIR5094-201ENST00000578766 85 ntBASIC1.17□□□□□ -2.22
LRRC42Q9Y546 AC009994.1-201ENST00000606889 253 ntBASIC1.17□□□□□ -2.22
LRRC42Q9Y546 AL121890.5-201ENST00000620848 304 ntBASIC1.17□□□□□ -2.22
LRRC42Q9Y546 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
LRRC42Q9Y546 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
LRRC42Q9Y546 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.16□□□□□ -2.22
LRRC42Q9Y546 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.16□□□□□ -2.22
LRRC42Q9Y546 RNU1-76P-201ENST00000362903 159 ntBASIC1.16□□□□□ -2.22
LRRC42Q9Y546 RNU6-296P-201ENST00000384608 107 ntBASIC1.16□□□□□ -2.22
LRRC42Q9Y546 AC002486.1-201ENST00000435098 391 ntBASIC1.16□□□□□ -2.22
LRRC42Q9Y546 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.16□□□□□ -2.22
LRRC42Q9Y546 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
LRRC42Q9Y546 AC016925.1-201ENST00000458303 298 ntBASIC1.16□□□□□ -2.22
LRRC42Q9Y546 RNU7-63P-201ENST00000459054 62 ntBASIC1.16□□□□□ -2.22
LRRC42Q9Y546 AC087477.1-201ENST00000465747 340 ntBASIC1.16□□□□□ -2.22
LRRC42Q9Y546 AC008628.2-201ENST00000502605 298 ntBASIC1.16□□□□□ -2.22
LRRC42Q9Y546 ARL2BPP4-201ENST00000506854 471 ntBASIC1.16□□□□□ -2.22
LRRC42Q9Y546 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.16□□□□□ -2.22
LRRC42Q9Y546 AC021231.3-201ENST00000558497 370 ntBASIC1.16□□□□□ -2.22
LRRC42Q9Y546 NIFKP6-201ENST00000598115 845 ntBASIC1.16□□□□□ -2.22
LRRC42Q9Y546 AL391646.1-201ENST00000603860 190 ntBASIC1.16□□□□□ -2.22
LRRC42Q9Y546 AC073114.1-201ENST00000612027 490 ntBASIC1.16□□□□□ -2.22
LRRC42Q9Y546 AC005520.5-201ENST00000613926 164 ntBASIC1.16□□□□□ -2.22
LRRC42Q9Y546 AC005609.4-201ENST00000625071 447 ntBASIC1.16□□□□□ -2.22
LRRC42Q9Y546 AC068205.3-201ENST00000636385 468 ntBASIC1.16□□□□□ -2.22
LRRC42Q9Y546 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.16□□□□□ -2.22
LRRC42Q9Y546 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
LRRC42Q9Y546 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
LRRC42Q9Y546 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
LRRC42Q9Y546 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.15□□□□□ -2.23
LRRC42Q9Y546 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
LRRC42Q9Y546 SNORD31B-201ENST00000364977 69 ntBASIC1.15□□□□□ -2.23
LRRC42Q9Y546 RNU6-996P-201ENST00000365438 107 ntBASIC1.15□□□□□ -2.23
LRRC42Q9Y546 RNU6-438P-201ENST00000365561 103 ntBASIC1.15□□□□□ -2.23
LRRC42Q9Y546 SNORD73A-201ENST00000386062 65 ntBASIC1.15□□□□□ -2.23
LRRC42Q9Y546 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.15□□□□□ -2.23
LRRC42Q9Y546 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.15□□□□□ -2.23
LRRC42Q9Y546 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.15□□□□□ -2.23
LRRC42Q9Y546 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.15□□□□□ -2.23
LRRC42Q9Y546 RNU7-14P-201ENST00000459331 62 ntBASIC1.15□□□□□ -2.23
LRRC42Q9Y546 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.15□□□□□ -2.23
LRRC42Q9Y546 Y_RNA.695-201ENST00000516715 107 ntBASIC1.15□□□□□ -2.23
LRRC42Q9Y546 RNU6-567P-201ENST00000516746 107 ntBASIC1.15□□□□□ -2.23
LRRC42Q9Y546 RNU6-548P-201ENST00000517083 115 ntBASIC1.15□□□□□ -2.23
LRRC42Q9Y546 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.15□□□□□ -2.23
LRRC42Q9Y546 AP003034.1-201ENST00000534621 422 ntBASIC1.15□□□□□ -2.23
LRRC42Q9Y546 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.15□□□□□ -2.23
LRRC42Q9Y546 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.15□□□□□ -2.23
LRRC42Q9Y546 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.15□□□□□ -2.23
LRRC42Q9Y546 AC087752.4-201ENST00000605911 462 ntBASIC1.15□□□□□ -2.23
LRRC42Q9Y546 AC063944.3-201ENST00000609969 533 ntBASIC1.15□□□□□ -2.23
LRRC42Q9Y546 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
LRRC42Q9Y546 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.15□□□□□ -2.23
LRRC42Q9Y546 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.15□□□□□ -2.23
LRRC42Q9Y546 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.15□□□□□ -2.23
LRRC42Q9Y546 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
LRRC42Q9Y546 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.14□□□□□ -2.23
LRRC42Q9Y546 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
LRRC42Q9Y546 SNORA22-201ENST00000383907 134 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 SNORA75-201ENST00000384158 137 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 SNORA70.7-201ENST00000384159 133 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 SNORA22C-201ENST00000384614 134 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 MIR208B-201ENST00000401172 77 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.14□□□□□ -2.23
LRRC42Q9Y546 RPL21P111-201ENST00000418453 477 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.14□□□□□ -2.23
LRRC42Q9Y546 CYCSP49-201ENST00000420810 319 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 AL591704.2-201ENST00000421658 181 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.14□□□□□ -2.23
LRRC42Q9Y546 OOSP1P1-201ENST00000423265 274 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
LRRC42Q9Y546 MTCO2P19-201ENST00000427513 598 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 AC099677.2-201ENST00000436385 175 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.14□□□□□ -2.23
LRRC42Q9Y546 MTCO2P3-201ENST00000442543 421 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms