Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
USB1Q9BQ65 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.27□□□□□ -1.73
USB1Q9BQ65 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USB1Q9BQ65 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USB1Q9BQ65 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USB1Q9BQ65 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
USB1Q9BQ65 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
USB1Q9BQ65 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USB1Q9BQ65 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USB1Q9BQ65 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
USB1Q9BQ65 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USB1Q9BQ65 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USB1Q9BQ65 Y_RNA.66-201ENST00000362862 102 ntBASIC4.26□□□□□ -1.73
USB1Q9BQ65 SNORA51.10-201ENST00000384418 136 ntBASIC4.26□□□□□ -1.73
USB1Q9BQ65 SDHCP2-201ENST00000398565 501 ntBASIC4.26□□□□□ -1.73
USB1Q9BQ65 EDDM3CP-201ENST00000415977 425 ntBASIC4.26□□□□□ -1.73
USB1Q9BQ65 AC063976.3-201ENST00000426849 329 ntBASIC4.26□□□□□ -1.73
USB1Q9BQ65 AC016831.4-201ENST00000438302 307 ntBASIC4.26□□□□□ -1.73
USB1Q9BQ65 RPS4XP11-201ENST00000446897 772 ntBASIC4.26□□□□□ -1.73
USB1Q9BQ65 AL162591.2-201ENST00000449634 317 ntBASIC4.26□□□□□ -1.73
USB1Q9BQ65 AL691482.1-201ENST00000453255 87 ntBASIC4.26□□□□□ -1.73
USB1Q9BQ65 RPS17P2-201ENST00000461663 408 ntBASIC4.26□□□□□ -1.73
USB1Q9BQ65 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.26□□□□□ -1.73
USB1Q9BQ65 RNA5SP236-201ENST00000516169 116 ntBASIC4.26□□□□□ -1.73
USB1Q9BQ65 AC025647.1-201ENST00000517879 253 ntBASIC4.26□□□□□ -1.73
USB1Q9BQ65 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.26□□□□□ -1.73
USB1Q9BQ65 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
USB1Q9BQ65 MIR3129-201ENST00000581095 76 ntBASIC4.26□□□□□ -1.73
USB1Q9BQ65 AC091979.2-201ENST00000607514 214 ntBASIC4.26□□□□□ -1.73
USB1Q9BQ65 uc_338.14-201ENST00000613162 166 ntBASIC4.26□□□□□ -1.73
USB1Q9BQ65 AC002076.2-201ENST00000617362 122 ntBASIC4.26□□□□□ -1.73
USB1Q9BQ65 AC090517.3-201ENST00000625170 141 ntBASIC4.26□□□□□ -1.73
USB1Q9BQ65 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.26□□□□□ -1.73
USB1Q9BQ65 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USB1Q9BQ65 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USB1Q9BQ65 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
USB1Q9BQ65 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USB1Q9BQ65 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USB1Q9BQ65 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
USB1Q9BQ65 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USB1Q9BQ65 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USB1Q9BQ65 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.26□□□□□ -1.73
USB1Q9BQ65 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.26□□□□□ -1.73
USB1Q9BQ65 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.26□□□□□ -1.73
USB1Q9BQ65 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USB1Q9BQ65 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USB1Q9BQ65 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.25□□□□□ -1.73
USB1Q9BQ65 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
USB1Q9BQ65 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.25□□□□□ -1.73
USB1Q9BQ65 AC092435.4-201ENST00000623012 4159 ntBASIC4.25□□□□□ -1.73
USB1Q9BQ65 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
USB1Q9BQ65 RPS16P5-201ENST00000406501 404 ntBASIC4.25□□□□□ -1.73
USB1Q9BQ65 MIR1294-201ENST00000408503 142 ntBASIC4.25□□□□□ -1.73
USB1Q9BQ65 RN7SKP267-201ENST00000410381 285 ntBASIC4.25□□□□□ -1.73
USB1Q9BQ65 RN7SKP177-201ENST00000410567 355 ntBASIC4.25□□□□□ -1.73
USB1Q9BQ65 HMGN2P16-201ENST00000456802 261 ntBASIC4.25□□□□□ -1.73
USB1Q9BQ65 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.25□□□□□ -1.73
USB1Q9BQ65 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.25□□□□□ -1.73
USB1Q9BQ65 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.25□□□□□ -1.73
USB1Q9BQ65 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.25□□□□□ -1.73
USB1Q9BQ65 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USB1Q9BQ65 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
USB1Q9BQ65 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.25□□□□□ -1.73
USB1Q9BQ65 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USB1Q9BQ65 AF117829.1-206ENST00000621883 3802 ntBASIC4.25□□□□□ -1.73
USB1Q9BQ65 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.25□□□□□ -1.73
USB1Q9BQ65 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.25□□□□□ -1.73
USB1Q9BQ65 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
USB1Q9BQ65 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
USB1Q9BQ65 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.24□□□□□ -1.73
USB1Q9BQ65 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.24□□□□□ -1.73
USB1Q9BQ65 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
USB1Q9BQ65 RNU6-1014P-201ENST00000383940 103 ntBASIC4.24□□□□□ -1.73
USB1Q9BQ65 RNU6-1113P-201ENST00000384348 107 ntBASIC4.24□□□□□ -1.73
USB1Q9BQ65 MIR3074-201ENST00000384885 81 ntBASIC4.24□□□□□ -1.73
USB1Q9BQ65 AC007064.1-201ENST00000412238 351 ntBASIC4.24□□□□□ -1.73
USB1Q9BQ65 EIF4EP4-201ENST00000424916 578 ntBASIC4.24□□□□□ -1.73
USB1Q9BQ65 RPL30P4-201ENST00000429309 333 ntBASIC4.24□□□□□ -1.73
USB1Q9BQ65 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.24□□□□□ -1.73
USB1Q9BQ65 AC108751.2-201ENST00000469993 231 ntBASIC4.24□□□□□ -1.73
USB1Q9BQ65 RNU6-970P-201ENST00000516312 107 ntBASIC4.24□□□□□ -1.73
USB1Q9BQ65 RNU6-948P-201ENST00000516374 107 ntBASIC4.24□□□□□ -1.73
USB1Q9BQ65 RNA5SP281-201ENST00000516504 135 ntBASIC4.24□□□□□ -1.73
USB1Q9BQ65 RNU6-504P-201ENST00000516568 104 ntBASIC4.24□□□□□ -1.73
USB1Q9BQ65 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.24□□□□□ -1.73
USB1Q9BQ65 FAM27B-201ENST00000610601 213 ntBASIC4.24□□□□□ -1.73
USB1Q9BQ65 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.24□□□□□ -1.73
USB1Q9BQ65 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USB1Q9BQ65 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.24□□□□□ -1.73
USB1Q9BQ65 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USB1Q9BQ65 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
USB1Q9BQ65 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
USB1Q9BQ65 AC016588.2-201ENST00000632484 3021 ntBASIC4.24□□□□□ -1.73
USB1Q9BQ65 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.24□□□□□ -1.73
USB1Q9BQ65 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
USB1Q9BQ65 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USB1Q9BQ65 AC009487.4-201ENST00000624969 3585 ntBASIC4.23□□□□□ -1.73
USB1Q9BQ65 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USB1Q9BQ65 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
USB1Q9BQ65 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms