Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 AMD1P1-201ENST00000457220 922 ntBASIC1.54□□□□□ -2.16
IFNB1P01574 AC010531.2-201ENST00000465012 153 ntBASIC1.54□□□□□ -2.16
IFNB1P01574 AC021146.2-201ENST00000504736 556 ntBASIC1.54□□□□□ -2.16
IFNB1P01574 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.54□□□□□ -2.16
IFNB1P01574 AC096745.1-201ENST00000509945 370 ntBASIC1.54□□□□□ -2.16
IFNB1P01574 RNU6-856P-201ENST00000516959 98 ntBASIC1.54□□□□□ -2.16
IFNB1P01574 RNU6-902P-201ENST00000517212 91 ntBASIC1.54□□□□□ -2.16
IFNB1P01574 MTND4P7-201ENST00000523876 130 ntBASIC1.54□□□□□ -2.16
IFNB1P01574 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.54□□□□□ -2.16
IFNB1P01574 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.54□□□□□ -2.16
IFNB1P01574 NIFKP6-201ENST00000598115 845 ntBASIC1.54□□□□□ -2.16
IFNB1P01574 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.54□□□□□ -2.16
IFNB1P01574 AL353149.1-201ENST00000610667 244 ntBASIC1.54□□□□□ -2.16
IFNB1P01574 AC083806.3-201ENST00000614016 455 ntBASIC1.54□□□□□ -2.16
IFNB1P01574 uc_338.34-201ENST00000617467 174 ntBASIC1.54□□□□□ -2.16
IFNB1P01574 AC010615.1-201ENST00000594254 1764 ntBASIC1.54□□□□□ -2.16
IFNB1P01574 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
IFNB1P01574 SNORD33-201ENST00000362761 85 ntBASIC1.53□□□□□ -2.16
IFNB1P01574 Y_RNA.132-201ENST00000363421 102 ntBASIC1.53□□□□□ -2.16
IFNB1P01574 RNU6-996P-201ENST00000365438 107 ntBASIC1.53□□□□□ -2.16
IFNB1P01574 MIR23A-201ENST00000385245 73 ntBASIC1.53□□□□□ -2.16
IFNB1P01574 SNORA26.9-201ENST00000391322 122 ntBASIC1.53□□□□□ -2.16
IFNB1P01574 RN7SKP142-201ENST00000411236 328 ntBASIC1.53□□□□□ -2.16
IFNB1P01574 AL513185.2-201ENST00000425543 193 ntBASIC1.53□□□□□ -2.16
IFNB1P01574 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.53□□□□□ -2.16
IFNB1P01574 AC073415.1-201ENST00000449240 153 ntBASIC1.53□□□□□ -2.16
IFNB1P01574 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.53□□□□□ -2.16
IFNB1P01574 RNU6-1037P-201ENST00000459571 107 ntBASIC1.53□□□□□ -2.16
IFNB1P01574 ARL2BPP4-201ENST00000506854 471 ntBASIC1.53□□□□□ -2.16
IFNB1P01574 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.53□□□□□ -2.16
IFNB1P01574 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.53□□□□□ -2.16
IFNB1P01574 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.53□□□□□ -2.16
IFNB1P01574 HMGB1P33-201ENST00000563485 527 ntBASIC1.53□□□□□ -2.16
IFNB1P01574 AC087752.4-201ENST00000605911 462 ntBASIC1.53□□□□□ -2.16
IFNB1P01574 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.53□□□□□ -2.16
IFNB1P01574 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.53□□□□□ -2.16
IFNB1P01574 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
IFNB1P01574 MIR302D-201ENST00000362275 68 ntBASIC1.52□□□□□ -2.17
IFNB1P01574 SNORA63D-201ENST00000364359 132 ntBASIC1.52□□□□□ -2.17
IFNB1P01574 MIR1289-2-201ENST00000408360 111 ntBASIC1.52□□□□□ -2.17
IFNB1P01574 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.52□□□□□ -2.17
IFNB1P01574 RPS26P42-201ENST00000413485 326 ntBASIC1.52□□□□□ -2.17
IFNB1P01574 AC245047.4-201ENST00000433189 144 ntBASIC1.52□□□□□ -2.17
IFNB1P01574 USP9YP28-201ENST00000435142 589 ntBASIC1.52□□□□□ -2.17
IFNB1P01574 AC099677.2-201ENST00000436385 175 ntBASIC1.52□□□□□ -2.17
IFNB1P01574 HSPE1P9-201ENST00000440046 311 ntBASIC1.52□□□□□ -2.17
IFNB1P01574 AC007677.1-201ENST00000445757 515 ntBASIC1.52□□□□□ -2.17
IFNB1P01574 AL513124.1-201ENST00000450410 614 ntBASIC1.52□□□□□ -2.17
IFNB1P01574 HSPE1P24-201ENST00000450782 238 ntBASIC1.52□□□□□ -2.17
IFNB1P01574 MTCO2P18-201ENST00000457151 658 ntBASIC1.52□□□□□ -2.17
IFNB1P01574 AL163973.1-201ENST00000484753 577 ntBASIC1.52□□□□□ -2.17
IFNB1P01574 AC067942.3-201ENST00000512025 362 ntBASIC1.52□□□□□ -2.17
IFNB1P01574 AC026470.2-201ENST00000561492 181 ntBASIC1.52□□□□□ -2.17
IFNB1P01574 SNORD53B-201ENST00000577887 78 ntBASIC1.52□□□□□ -2.17
IFNB1P01574 MIR3683-201ENST00000580847 82 ntBASIC1.52□□□□□ -2.17
IFNB1P01574 AC004223.2-201ENST00000590309 544 ntBASIC1.52□□□□□ -2.17
IFNB1P01574 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.52□□□□□ -2.17
IFNB1P01574 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
IFNB1P01574 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.52□□□□□ -2.17
IFNB1P01574 AC009541.1-201ENST00000438279 2662 ntBASIC1.51□□□□□ -2.17
IFNB1P01574 RNA5SP190-201ENST00000365222 118 ntBASIC1.51□□□□□ -2.17
IFNB1P01574 SNORA36A-201ENST00000384221 132 ntBASIC1.51□□□□□ -2.17
IFNB1P01574 MIR517C-201ENST00000385103 95 ntBASIC1.51□□□□□ -2.17
IFNB1P01574 AL354695.1-201ENST00000427935 228 ntBASIC1.51□□□□□ -2.17
IFNB1P01574 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.51□□□□□ -2.17
IFNB1P01574 RPS29P23-201ENST00000458635 123 ntBASIC1.51□□□□□ -2.17
IFNB1P01574 MTCO3P38-201ENST00000468910 766 ntBASIC1.51□□□□□ -2.17
IFNB1P01574 RPS26P55-201ENST00000471178 356 ntBASIC1.51□□□□□ -2.17
IFNB1P01574 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.51□□□□□ -2.17
IFNB1P01574 SNORA14.1-201ENST00000516113 141 ntBASIC1.51□□□□□ -2.17
IFNB1P01574 MIR4528-201ENST00000577763 90 ntBASIC1.51□□□□□ -2.17
IFNB1P01574 AP005136.1-201ENST00000579765 429 ntBASIC1.51□□□□□ -2.17
IFNB1P01574 VN1R80P-201ENST00000597126 338 ntBASIC1.51□□□□□ -2.17
IFNB1P01574 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.51□□□□□ -2.17
IFNB1P01574 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
IFNB1P01574 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.5□□□□□ -2.17
IFNB1P01574 AC245060.5-201ENST00000610778 3293 ntBASIC1.5□□□□□ -2.17
IFNB1P01574 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
IFNB1P01574 MTND5P10-201ENST00000603719 1809 ntBASIC1.5□□□□□ -2.17
IFNB1P01574 RNU6-227P-201ENST00000362865 103 ntBASIC1.5□□□□□ -2.17
IFNB1P01574 RNU6-271P-201ENST00000363858 105 ntBASIC1.5□□□□□ -2.17
IFNB1P01574 RNU6-82P-201ENST00000363970 107 ntBASIC1.5□□□□□ -2.17
IFNB1P01574 RNU1-42P-201ENST00000364033 160 ntBASIC1.5□□□□□ -2.17
IFNB1P01574 RNU6-348P-201ENST00000384386 107 ntBASIC1.5□□□□□ -2.17
IFNB1P01574 SNORA67.6-201ENST00000391093 99 ntBASIC1.5□□□□□ -2.17
IFNB1P01574 AC073464.1-201ENST00000429823 534 ntBASIC1.5□□□□□ -2.17
IFNB1P01574 RNU6-612P-201ENST00000516909 102 ntBASIC1.5□□□□□ -2.17
IFNB1P01574 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.5□□□□□ -2.17
IFNB1P01574 AP000873.5-201ENST00000533906 236 ntBASIC1.5□□□□□ -2.17
IFNB1P01574 AC015720.1-201ENST00000565251 277 ntBASIC1.5□□□□□ -2.17
IFNB1P01574 MIR5583-1-201ENST00000580941 59 ntBASIC1.5□□□□□ -2.17
IFNB1P01574 MIR4424-201ENST00000585257 86 ntBASIC1.5□□□□□ -2.17
IFNB1P01574 AC087683.1-201ENST00000591187 441 ntBASIC1.5□□□□□ -2.17
IFNB1P01574 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.5□□□□□ -2.17
IFNB1P01574 HULC.1-201ENST00000612720 240 ntBASIC1.5□□□□□ -2.17
IFNB1P01574 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
IFNB1P01574 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.5□□□□□ -2.17
IFNB1P01574 ICE2P2-201ENST00000483823 2787 ntBASIC1.49□□□□□ -2.17
IFNB1P01574 AL161722.3-201ENST00000605789 2983 ntBASIC1.49□□□□□ -2.17
IFNB1P01574 RNU6-862P-201ENST00000362804 105 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms