Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 SNORD32A-201ENST00000364805 84 ntBASIC3.46□□□□□ -1.86
TRIM13O60858 RNA5SP283-201ENST00000365604 119 ntBASIC3.46□□□□□ -1.86
TRIM13O60858 RNU6-140P-201ENST00000384566 108 ntBASIC3.46□□□□□ -1.86
TRIM13O60858 RNU6-578P-201ENST00000390980 103 ntBASIC3.46□□□□□ -1.86
TRIM13O60858 RNU6-1199P-201ENST00000411249 104 ntBASIC3.46□□□□□ -1.86
TRIM13O60858 RN7SKP53-201ENST00000411337 315 ntBASIC3.46□□□□□ -1.86
TRIM13O60858 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.46□□□□□ -1.86
TRIM13O60858 AC010095.1-201ENST00000443543 144 ntBASIC3.46□□□□□ -1.86
TRIM13O60858 AL121594.1-201ENST00000475906 575 ntBASIC3.46□□□□□ -1.86
TRIM13O60858 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.46□□□□□ -1.86
TRIM13O60858 MIR4744-201ENST00000581563 82 ntBASIC3.46□□□□□ -1.86
TRIM13O60858 AC024153.1-201ENST00000603103 365 ntBASIC3.46□□□□□ -1.86
TRIM13O60858 AL590392.1-201ENST00000604960 446 ntBASIC3.46□□□□□ -1.86
TRIM13O60858 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM13O60858 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM13O60858 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.45□□□□□ -1.86
TRIM13O60858 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TRIM13O60858 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM13O60858 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM13O60858 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.45□□□□□ -1.86
TRIM13O60858 RNU6-199P-201ENST00000362954 107 ntBASIC3.45□□□□□ -1.86
TRIM13O60858 RNU6-103P-201ENST00000363686 107 ntBASIC3.45□□□□□ -1.86
TRIM13O60858 RNU6-142P-201ENST00000384019 107 ntBASIC3.45□□□□□ -1.86
TRIM13O60858 RNU6-476P-201ENST00000384726 107 ntBASIC3.45□□□□□ -1.86
TRIM13O60858 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
TRIM13O60858 RNU6-1248P-201ENST00000391096 64 ntBASIC3.45□□□□□ -1.86
TRIM13O60858 Y_RNA.595-201ENST00000410403 105 ntBASIC3.45□□□□□ -1.86
TRIM13O60858 RNA5SP31-201ENST00000411144 127 ntBASIC3.45□□□□□ -1.86
TRIM13O60858 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM13O60858 AC093578.1-201ENST00000415219 368 ntBASIC3.45□□□□□ -1.86
TRIM13O60858 AC138623.1-201ENST00000418060 216 ntBASIC3.45□□□□□ -1.86
TRIM13O60858 AL358075.3-201ENST00000426289 226 ntBASIC3.45□□□□□ -1.86
TRIM13O60858 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM13O60858 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM13O60858 RPS4XP13-201ENST00000483219 789 ntBASIC3.45□□□□□ -1.86
TRIM13O60858 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.45□□□□□ -1.86
TRIM13O60858 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM13O60858 RNU6-1198P-201ENST00000516904 67 ntBASIC3.45□□□□□ -1.86
TRIM13O60858 Y_RNA.709-201ENST00000516952 92 ntBASIC3.45□□□□□ -1.86
TRIM13O60858 AC009127.3-201ENST00000570531 403 ntBASIC3.45□□□□□ -1.86
TRIM13O60858 AC136624.4-201ENST00000573044 370 ntBASIC3.45□□□□□ -1.86
TRIM13O60858 MIR5571-201ENST00000577998 113 ntBASIC3.45□□□□□ -1.86
TRIM13O60858 MIR6129-201ENST00000616087 109 ntBASIC3.45□□□□□ -1.86
TRIM13O60858 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.45□□□□□ -1.86
TRIM13O60858 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.45□□□□□ -1.86
TRIM13O60858 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM13O60858 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM13O60858 SRP72P2-201ENST00000344851 1979 ntBASIC3.45□□□□□ -1.86
TRIM13O60858 FAM35BP-202ENST00000497389 3337 ntBASIC3.45□□□□□ -1.86
TRIM13O60858 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM13O60858 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM13O60858 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.44□□□□□ -1.86
TRIM13O60858 MFSD8-233ENST00000641482 4860 ntBASIC3.44□□□□□ -1.86
TRIM13O60858 AL513302.2-201ENST00000562313 1842 ntBASIC3.44□□□□□ -1.86
TRIM13O60858 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM13O60858 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM13O60858 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM13O60858 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM13O60858 AC126755.2-208ENST00000327792 462 ntBASIC3.44□□□□□ -1.86
TRIM13O60858 AC138969.1-213ENST00000331436 462 ntBASIC3.44□□□□□ -1.86
TRIM13O60858 RNU6-217P-201ENST00000384164 104 ntBASIC3.44□□□□□ -1.86
TRIM13O60858 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
TRIM13O60858 HSPE1P26-201ENST00000405341 275 ntBASIC3.44□□□□□ -1.86
TRIM13O60858 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM13O60858 YPEL5P1-201ENST00000419731 367 ntBASIC3.44□□□□□ -1.86
TRIM13O60858 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM13O60858 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.44□□□□□ -1.86
TRIM13O60858 EEF1B2P7-201ENST00000451177 676 ntBASIC3.44□□□□□ -1.86
TRIM13O60858 RNU6-625P-201ENST00000459412 107 ntBASIC3.44□□□□□ -1.86
TRIM13O60858 RPL23AP67-201ENST00000465341 474 ntBASIC3.44□□□□□ -1.86
TRIM13O60858 RN7SL442P-201ENST00000473804 320 ntBASIC3.44□□□□□ -1.86
TRIM13O60858 RAC1P5-201ENST00000512182 576 ntBASIC3.44□□□□□ -1.86
TRIM13O60858 AP004607.1-201ENST00000524456 203 ntBASIC3.44□□□□□ -1.86
TRIM13O60858 AC115990.1-201ENST00000526957 301 ntBASIC3.44□□□□□ -1.86
TRIM13O60858 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM13O60858 AC006254.2-201ENST00000603259 279 ntBASIC3.44□□□□□ -1.86
TRIM13O60858 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.44□□□□□ -1.86
TRIM13O60858 AC069294.1-201ENST00000608397 350 ntBASIC3.44□□□□□ -1.86
TRIM13O60858 FTX_3.1-201ENST00000610451 147 ntBASIC3.44□□□□□ -1.86
TRIM13O60858 AC011603.4-201ENST00000611325 277 ntBASIC3.44□□□□□ -1.86
TRIM13O60858 AC010999.1-201ENST00000611856 324 ntBASIC3.44□□□□□ -1.86
TRIM13O60858 MIR6875-201ENST00000617506 72 ntBASIC3.44□□□□□ -1.86
TRIM13O60858 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.44□□□□□ -1.86
TRIM13O60858 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.44□□□□□ -1.86
TRIM13O60858 AL034408.1-202ENST00000636088 415 ntBASIC3.44□□□□□ -1.86
TRIM13O60858 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.44□□□□□ -1.86
TRIM13O60858 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM13O60858 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM13O60858 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM13O60858 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM13O60858 AC007496.3-201ENST00000624987 3443 ntBASIC3.43□□□□□ -1.86
TRIM13O60858 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM13O60858 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
TRIM13O60858 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM13O60858 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM13O60858 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM13O60858 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
TRIM13O60858 RNU6-873P-201ENST00000363833 107 ntBASIC3.43□□□□□ -1.86
TRIM13O60858 RNU6-270P-201ENST00000364131 105 ntBASIC3.43□□□□□ -1.86
TRIM13O60858 Y_RNA.337-201ENST00000365312 102 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 234 ms