Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 RNU6-159P-201ENST00000391080 106 ntBASIC4.16□□□□□ -1.74
SPG7Q9UQ90 RNU6-1001P-201ENST00000411265 100 ntBASIC4.16□□□□□ -1.74
SPG7Q9UQ90 AL590135.1-201ENST00000422215 156 ntBASIC4.16□□□□□ -1.74
SPG7Q9UQ90 AC019205.3-201ENST00000424573 156 ntBASIC4.16□□□□□ -1.74
SPG7Q9UQ90 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.16□□□□□ -1.74
SPG7Q9UQ90 AC004383.1-201ENST00000438135 289 ntBASIC4.16□□□□□ -1.74
SPG7Q9UQ90 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.16□□□□□ -1.74
SPG7Q9UQ90 RNU6-1338P-201ENST00000516328 91 ntBASIC4.16□□□□□ -1.74
SPG7Q9UQ90 AC091152.3-201ENST00000604227 325 ntBASIC4.16□□□□□ -1.74
SPG7Q9UQ90 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SPG7Q9UQ90 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SPG7Q9UQ90 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SPG7Q9UQ90 HSPA8P1-201ENST00000425843 1833 ntBASIC4.16□□□□□ -1.74
SPG7Q9UQ90 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SPG7Q9UQ90 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.16□□□□□ -1.74
SPG7Q9UQ90 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SPG7Q9UQ90 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.74
SPG7Q9UQ90 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SPG7Q9UQ90 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SPG7Q9UQ90 MIR30E-201ENST00000362104 92 ntBASIC4.15□□□□□ -1.75
SPG7Q9UQ90 Y_RNA.541-201ENST00000384640 113 ntBASIC4.15□□□□□ -1.75
SPG7Q9UQ90 EI24P2-201ENST00000397776 1076 ntBASIC4.15□□□□□ -1.75
SPG7Q9UQ90 MIR1183-201ENST00000408856 89 ntBASIC4.15□□□□□ -1.75
SPG7Q9UQ90 RN7SKP220-201ENST00000410611 288 ntBASIC4.15□□□□□ -1.75
SPG7Q9UQ90 AC245291.1-201ENST00000419501 328 ntBASIC4.15□□□□□ -1.75
SPG7Q9UQ90 AP000705.1-201ENST00000454567 350 ntBASIC4.15□□□□□ -1.75
SPG7Q9UQ90 RNU7-23P-201ENST00000459465 62 ntBASIC4.15□□□□□ -1.75
SPG7Q9UQ90 AP002884.2-201ENST00000471647 395 ntBASIC4.15□□□□□ -1.75
SPG7Q9UQ90 SNORA70.14-201ENST00000516205 110 ntBASIC4.15□□□□□ -1.75
SPG7Q9UQ90 SNORA31.6-201ENST00000516241 130 ntBASIC4.15□□□□□ -1.75
SPG7Q9UQ90 SNORA31.16-201ENST00000516773 139 ntBASIC4.15□□□□□ -1.75
SPG7Q9UQ90 NDUFB9P3-201ENST00000521269 501 ntBASIC4.15□□□□□ -1.75
SPG7Q9UQ90 AL138880.2-201ENST00000616214 239 ntBASIC4.15□□□□□ -1.75
SPG7Q9UQ90 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.15□□□□□ -1.75
SPG7Q9UQ90 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SPG7Q9UQ90 AC007496.3-201ENST00000624987 3443 ntBASIC4.15□□□□□ -1.75
SPG7Q9UQ90 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.15□□□□□ -1.75
SPG7Q9UQ90 Y_RNA.20-201ENST00000362479 113 ntBASIC4.14□□□□□ -1.75
SPG7Q9UQ90 Y_RNA.54-201ENST00000362766 105 ntBASIC4.14□□□□□ -1.75
SPG7Q9UQ90 SNORA71.1-201ENST00000364523 117 ntBASIC4.14□□□□□ -1.75
SPG7Q9UQ90 RNU6-281P-201ENST00000384212 103 ntBASIC4.14□□□□□ -1.75
SPG7Q9UQ90 SNORA54-201ENST00000384281 123 ntBASIC4.14□□□□□ -1.75
SPG7Q9UQ90 RNU6-102P-201ENST00000384485 104 ntBASIC4.14□□□□□ -1.75
SPG7Q9UQ90 SNORD15B-201ENST00000384714 146 ntBASIC4.14□□□□□ -1.75
SPG7Q9UQ90 SNORA26.3-201ENST00000391119 136 ntBASIC4.14□□□□□ -1.75
SPG7Q9UQ90 RHEBP3-201ENST00000411920 351 ntBASIC4.14□□□□□ -1.75
SPG7Q9UQ90 AC012306.1-201ENST00000423267 114 ntBASIC4.14□□□□□ -1.75
SPG7Q9UQ90 CST9LP2-201ENST00000437612 320 ntBASIC4.14□□□□□ -1.75
SPG7Q9UQ90 RN7SKP49-201ENST00000516675 260 ntBASIC4.14□□□□□ -1.75
SPG7Q9UQ90 MIR2276-201ENST00000516886 89 ntBASIC4.14□□□□□ -1.75
SPG7Q9UQ90 RNU6-1198P-201ENST00000516904 67 ntBASIC4.14□□□□□ -1.75
SPG7Q9UQ90 SNORD19.2-201ENST00000516978 73 ntBASIC4.14□□□□□ -1.75
SPG7Q9UQ90 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.14□□□□□ -1.75
SPG7Q9UQ90 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.14□□□□□ -1.75
SPG7Q9UQ90 AL078605.1-201ENST00000603529 500 ntBASIC4.14□□□□□ -1.75
SPG7Q9UQ90 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.14□□□□□ -1.75
SPG7Q9UQ90 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.14□□□□□ -1.75
SPG7Q9UQ90 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.14□□□□□ -1.75
SPG7Q9UQ90 AC002543.1-201ENST00000299783 1954 ntBASIC4.14□□□□□ -1.75
SPG7Q9UQ90 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.14□□□□□ -1.75
SPG7Q9UQ90 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SPG7Q9UQ90 RNU6-137P-201ENST00000363680 108 ntBASIC4.13□□□□□ -1.75
SPG7Q9UQ90 AL358075.3-201ENST00000426289 226 ntBASIC4.13□□□□□ -1.75
SPG7Q9UQ90 SETP5-201ENST00000437270 562 ntBASIC4.13□□□□□ -1.75
SPG7Q9UQ90 AC005002.2-201ENST00000438228 269 ntBASIC4.13□□□□□ -1.75
SPG7Q9UQ90 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.13□□□□□ -1.75
SPG7Q9UQ90 AC090525.1-201ENST00000479116 478 ntBASIC4.13□□□□□ -1.75
SPG7Q9UQ90 SCARNA24.2-201ENST00000516968 130 ntBASIC4.13□□□□□ -1.75
SPG7Q9UQ90 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.13□□□□□ -1.75
SPG7Q9UQ90 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.13□□□□□ -1.75
SPG7Q9UQ90 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.13□□□□□ -1.75
SPG7Q9UQ90 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.13□□□□□ -1.75
SPG7Q9UQ90 AC006111.3-201ENST00000622137 383 ntBASIC4.13□□□□□ -1.75
SPG7Q9UQ90 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.13□□□□□ -1.75
SPG7Q9UQ90 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SPG7Q9UQ90 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SPG7Q9UQ90 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SPG7Q9UQ90 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SPG7Q9UQ90 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SPG7Q9UQ90 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.12□□□□□ -1.75
SPG7Q9UQ90 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.12□□□□□ -1.75
SPG7Q9UQ90 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SPG7Q9UQ90 SNORA5B-201ENST00000363786 132 ntBASIC4.12□□□□□ -1.75
SPG7Q9UQ90 RNU6-338P-201ENST00000383888 105 ntBASIC4.12□□□□□ -1.75
SPG7Q9UQ90 RNU6-748P-201ENST00000384648 107 ntBASIC4.12□□□□□ -1.75
SPG7Q9UQ90 RNA5SP252-201ENST00000391131 119 ntBASIC4.12□□□□□ -1.75
SPG7Q9UQ90 AL603910.2-201ENST00000407268 136 ntBASIC4.12□□□□□ -1.75
SPG7Q9UQ90 AL139109.1-201ENST00000455491 297 ntBASIC4.12□□□□□ -1.75
SPG7Q9UQ90 RPL23AP62-201ENST00000463396 453 ntBASIC4.12□□□□□ -1.75
SPG7Q9UQ90 AC021205.2-201ENST00000480069 347 ntBASIC4.12□□□□□ -1.75
SPG7Q9UQ90 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.12□□□□□ -1.75
SPG7Q9UQ90 RNU6-496P-201ENST00000516145 99 ntBASIC4.12□□□□□ -1.75
SPG7Q9UQ90 AC115990.1-201ENST00000526957 301 ntBASIC4.12□□□□□ -1.75
SPG7Q9UQ90 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.12□□□□□ -1.75
SPG7Q9UQ90 AC105137.2-201ENST00000569073 466 ntBASIC4.12□□□□□ -1.75
SPG7Q9UQ90 AC000403.1-201ENST00000613696 3585 ntBASIC4.12□□□□□ -1.75
SPG7Q9UQ90 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SPG7Q9UQ90 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
SPG7Q9UQ90 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.11□□□□□ -1.75
SPG7Q9UQ90 SNORD115-8-201ENST00000363856 82 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms