Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 RPL22P13-201ENST00000493291 347 ntBASIC3.14□□□□□ -1.91
SLC44A4Q53GD3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC44A4Q53GD3 RN7SKP132-201ENST00000516001 208 ntBASIC3.14□□□□□ -1.91
SLC44A4Q53GD3 SCARNA17.1-201ENST00000516211 143 ntBASIC3.14□□□□□ -1.91
SLC44A4Q53GD3 SCARNA17.2-201ENST00000516334 143 ntBASIC3.14□□□□□ -1.91
SLC44A4Q53GD3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SLC44A4Q53GD3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC44A4Q53GD3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.14□□□□□ -1.91
SLC44A4Q53GD3 AC090897.2-201ENST00000581715 130 ntBASIC3.14□□□□□ -1.91
SLC44A4Q53GD3 AL355297.3-201ENST00000604082 446 ntBASIC3.14□□□□□ -1.91
SLC44A4Q53GD3 AC107871.2-201ENST00000612894 502 ntBASIC3.14□□□□□ -1.91
SLC44A4Q53GD3 SCARNA17.4-201ENST00000614296 143 ntBASIC3.14□□□□□ -1.91
SLC44A4Q53GD3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.14□□□□□ -1.91
SLC44A4Q53GD3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SLC44A4Q53GD3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 AC093010.3-201ENST00000570269 15214 ntBASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 AC009541.1-201ENST00000438279 2662 ntBASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 RNU6-379P-201ENST00000363813 104 ntBASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 SNORD32A-201ENST00000364805 84 ntBASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 Y_RNA.307-201ENST00000365022 117 ntBASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 Y_RNA.380-201ENST00000365663 111 ntBASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 RNU6-1027P-201ENST00000383998 107 ntBASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 BTF3L4P2-201ENST00000392798 346 ntBASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 RNA5SP184-201ENST00000411071 108 ntBASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 AC083906.5-201ENST00000503722 328 ntBASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 RNU6-388P-201ENST00000517012 105 ntBASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 RNU6-389P-201ENST00000517048 105 ntBASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 Y_RNA.715-201ENST00000517082 110 ntBASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 AC040926.1-201ENST00000530195 238 ntBASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 AC006600.1-201ENST00000572529 153 ntBASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 MIR4319-201ENST00000577285 85 ntBASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 AC100812.1-201ENST00000607622 580 ntBASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 AC091903.1-201ENST00000624322 454 ntBASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 AC073476.4-201ENST00000628409 72 ntBASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.13□□□□□ -1.91
SLC44A4Q53GD3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 Y_RNA.26-201ENST00000362539 101 ntBASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 RPL21P1-201ENST00000399532 476 ntBASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 AL591034.2-201ENST00000402839 359 ntBASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 AC105272.1-201ENST00000438604 198 ntBASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 OSTCP8-201ENST00000445117 448 ntBASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 AC079354.2-201ENST00000453523 154 ntBASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 AC104564.1-201ENST00000493028 407 ntBASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 SCGB1D5P-201ENST00000515134 247 ntBASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 Y_RNA.668-201ENST00000516233 93 ntBASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 RPS15AP11-201ENST00000594193 385 ntBASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 AC008739.2-201ENST00000597006 317 ntBASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 AC016727.2-201ENST00000603988 621 ntBASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 Z98751.3-201ENST00000604447 521 ntBASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 AC062037.2-201ENST00000610137 73 ntBASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 AL442067.1-201ENST00000613261 223 ntBASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 IGHVIII-44-202ENST00000636235 289 ntBASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC44A4Q53GD3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 MTND5P9-201ENST00000503854 1755 ntBASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 Y_RNA.152-201ENST00000363578 100 ntBASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 RNU6-806P-201ENST00000365147 105 ntBASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 Y_RNA.556-201ENST00000384677 113 ntBASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 AC138623.1-201ENST00000418060 216 ntBASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 ELOCP20-201ENST00000422460 345 ntBASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 OOSP1P1-201ENST00000423265 274 ntBASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 AC092423.1-201ENST00000430165 186 ntBASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 RPL39P40-201ENST00000445481 146 ntBASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 RPL39P29-201ENST00000447779 157 ntBASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 AC108938.1-201ENST00000451204 136 ntBASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 MTCO3P8-201ENST00000453691 755 ntBASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 RPS29P12-201ENST00000460178 152 ntBASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 SNORA40.14-201ENST00000516543 86 ntBASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 RNU5B-3P-201ENST00000516601 115 ntBASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 CKS1BP7-201ENST00000522230 235 ntBASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 MRPS36P4-201ENST00000534436 298 ntBASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 AC125232.2-201ENST00000592457 143 ntBASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 AC009318.2-201ENST00000610917 651 ntBASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms