Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 LINC02555-201ENST00000563933 1951 ntBASIC1.5□□□□□ -2.17
UPK3AO75631 WWP1P1-201ENST00000466609 2769 ntBASIC1.5□□□□□ -2.17
UPK3AO75631 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
UPK3AO75631 Y_RNA.1-201ENST00000352915 104 ntBASIC1.5□□□□□ -2.17
UPK3AO75631 RNU6-234P-201ENST00000365229 104 ntBASIC1.5□□□□□ -2.17
UPK3AO75631 RNA5SP219-201ENST00000390940 113 ntBASIC1.5□□□□□ -2.17
UPK3AO75631 RNU6-1158P-201ENST00000391167 107 ntBASIC1.5□□□□□ -2.17
UPK3AO75631 AL627390.1-201ENST00000396055 340 ntBASIC1.5□□□□□ -2.17
UPK3AO75631 AL353193.1-201ENST00000421444 268 ntBASIC1.5□□□□□ -2.17
UPK3AO75631 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.5□□□□□ -2.17
UPK3AO75631 VN1R108P-201ENST00000431580 830 ntBASIC1.5□□□□□ -2.17
UPK3AO75631 AL121601.2-201ENST00000438019 707 ntBASIC1.5□□□□□ -2.17
UPK3AO75631 HMGN2P18-201ENST00000450680 270 ntBASIC1.5□□□□□ -2.17
UPK3AO75631 AL163973.1-201ENST00000484753 577 ntBASIC1.5□□□□□ -2.17
UPK3AO75631 RNVU1-2-201ENST00000516326 135 ntBASIC1.5□□□□□ -2.17
UPK3AO75631 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.5□□□□□ -2.17
UPK3AO75631 AC087441.2-201ENST00000529141 262 ntBASIC1.5□□□□□ -2.17
UPK3AO75631 VN1R107P-201ENST00000601784 209 ntBASIC1.5□□□□□ -2.17
UPK3AO75631 AL356157.2-201ENST00000605122 111 ntBASIC1.5□□□□□ -2.17
UPK3AO75631 MIR8074-201ENST00000615081 81 ntBASIC1.5□□□□□ -2.17
UPK3AO75631 AL353997.5-201ENST00000618886 171 ntBASIC1.5□□□□□ -2.17
UPK3AO75631 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
UPK3AO75631 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
UPK3AO75631 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.49□□□□□ -2.17
UPK3AO75631 MIR424-201ENST00000362227 98 ntBASIC1.49□□□□□ -2.17
UPK3AO75631 Y_RNA.332-201ENST00000365271 113 ntBASIC1.49□□□□□ -2.17
UPK3AO75631 RNU6-1103P-201ENST00000384150 107 ntBASIC1.49□□□□□ -2.17
UPK3AO75631 Y_RNA.504-201ENST00000384481 104 ntBASIC1.49□□□□□ -2.17
UPK3AO75631 RNY3P9-201ENST00000384727 106 ntBASIC1.49□□□□□ -2.17
UPK3AO75631 RN7SKP61-201ENST00000410642 295 ntBASIC1.49□□□□□ -2.17
UPK3AO75631 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.49□□□□□ -2.17
UPK3AO75631 AC078809.1-201ENST00000427601 140 ntBASIC1.49□□□□□ -2.17
UPK3AO75631 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.49□□□□□ -2.17
UPK3AO75631 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.49□□□□□ -2.17
UPK3AO75631 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.49□□□□□ -2.17
UPK3AO75631 HMGB1P29-201ENST00000505659 499 ntBASIC1.49□□□□□ -2.17
UPK3AO75631 CCDC34P1-201ENST00000507441 517 ntBASIC1.49□□□□□ -2.17
UPK3AO75631 AC025465.3-201ENST00000510570 311 ntBASIC1.49□□□□□ -2.17
UPK3AO75631 AC091874.1-201ENST00000511402 339 ntBASIC1.49□□□□□ -2.17
UPK3AO75631 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.49□□□□□ -2.17
UPK3AO75631 RNU6-970P-201ENST00000516312 107 ntBASIC1.49□□□□□ -2.17
UPK3AO75631 SNORA25.15-201ENST00000516487 89 ntBASIC1.49□□□□□ -2.17
UPK3AO75631 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.49□□□□□ -2.17
UPK3AO75631 AC109446.1-201ENST00000566172 220 ntBASIC1.49□□□□□ -2.17
UPK3AO75631 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.49□□□□□ -2.17
UPK3AO75631 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.49□□□□□ -2.17
UPK3AO75631 AC012507.3-201ENST00000603556 477 ntBASIC1.49□□□□□ -2.17
UPK3AO75631 BNIP3P10-201ENST00000605360 577 ntBASIC1.49□□□□□ -2.17
UPK3AO75631 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.49□□□□□ -2.17
UPK3AO75631 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
UPK3AO75631 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.48□□□□□ -2.17
UPK3AO75631 AC092268.1-201ENST00000342691 405 ntBASIC1.48□□□□□ -2.17
UPK3AO75631 RNA5SP363-201ENST00000365072 115 ntBASIC1.48□□□□□ -2.17
UPK3AO75631 SNORD73A-201ENST00000386062 65 ntBASIC1.48□□□□□ -2.17
UPK3AO75631 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
UPK3AO75631 MIR764-201ENST00000390811 85 ntBASIC1.48□□□□□ -2.17
UPK3AO75631 SNORD37.1-201ENST00000390968 65 ntBASIC1.48□□□□□ -2.17
UPK3AO75631 RNU4-55P-201ENST00000410731 137 ntBASIC1.48□□□□□ -2.17
UPK3AO75631 CDK8P2-201ENST00000415020 547 ntBASIC1.48□□□□□ -2.17
UPK3AO75631 AL358453.1-201ENST00000422522 250 ntBASIC1.48□□□□□ -2.17
UPK3AO75631 AL606489.2-201ENST00000433886 234 ntBASIC1.48□□□□□ -2.17
UPK3AO75631 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.48□□□□□ -2.17
UPK3AO75631 AC098826.2-201ENST00000452011 651 ntBASIC1.48□□□□□ -2.17
UPK3AO75631 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.48□□□□□ -2.17
UPK3AO75631 RPL31P3-201ENST00000458430 332 ntBASIC1.48□□□□□ -2.17
UPK3AO75631 AC016632.1-201ENST00000503994 196 ntBASIC1.48□□□□□ -2.17
UPK3AO75631 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.48□□□□□ -2.17
UPK3AO75631 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.48□□□□□ -2.17
UPK3AO75631 AC079140.3-201ENST00000511111 550 ntBASIC1.48□□□□□ -2.17
UPK3AO75631 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.48□□□□□ -2.17
UPK3AO75631 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.48□□□□□ -2.17
UPK3AO75631 AC090115.3-201ENST00000553218 849 ntBASIC1.48□□□□□ -2.17
UPK3AO75631 MIR3923-201ENST00000579521 83 ntBASIC1.48□□□□□ -2.17
UPK3AO75631 AC078795.3-201ENST00000602913 472 ntBASIC1.48□□□□□ -2.17
UPK3AO75631 AP001836.1-201ENST00000604675 523 ntBASIC1.48□□□□□ -2.17
UPK3AO75631 RN7SKP299-201ENST00000606679 301 ntBASIC1.48□□□□□ -2.17
UPK3AO75631 HULC.1-201ENST00000612720 240 ntBASIC1.48□□□□□ -2.17
UPK3AO75631 AC022079.1-201ENST00000621546 602 ntBASIC1.48□□□□□ -2.17
UPK3AO75631 Y_RNA.255-201ENST00000364581 97 ntBASIC1.47□□□□□ -2.17
UPK3AO75631 RNU6-438P-201ENST00000365561 103 ntBASIC1.47□□□□□ -2.17
UPK3AO75631 RNU6-338P-201ENST00000383888 105 ntBASIC1.47□□□□□ -2.17
UPK3AO75631 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.47□□□□□ -2.17
UPK3AO75631 MTCYBP2-201ENST00000407745 171 ntBASIC1.47□□□□□ -2.17
UPK3AO75631 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.47□□□□□ -2.17
UPK3AO75631 MTCO3P41-201ENST00000414801 328 ntBASIC1.47□□□□□ -2.17
UPK3AO75631 AC123900.1-201ENST00000420390 96 ntBASIC1.47□□□□□ -2.17
UPK3AO75631 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.47□□□□□ -2.17
UPK3AO75631 RPL23AP95-201ENST00000426806 265 ntBASIC1.47□□□□□ -2.17
UPK3AO75631 AL133396.1-201ENST00000432048 687 ntBASIC1.47□□□□□ -2.17
UPK3AO75631 MTCO2P18-201ENST00000457151 658 ntBASIC1.47□□□□□ -2.17
UPK3AO75631 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.47□□□□□ -2.17
UPK3AO75631 TPT1P7-201ENST00000458300 517 ntBASIC1.47□□□□□ -2.17
UPK3AO75631 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.47□□□□□ -2.17
UPK3AO75631 AC108078.1-201ENST00000508073 725 ntBASIC1.47□□□□□ -2.17
UPK3AO75631 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.47□□□□□ -2.17
UPK3AO75631 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.47□□□□□ -2.17
UPK3AO75631 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.47□□□□□ -2.17
UPK3AO75631 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.47□□□□□ -2.17
UPK3AO75631 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.47□□□□□ -2.17
UPK3AO75631 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 224.1 ms