Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXC1Q12948 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXC1Q12948 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXC1Q12948 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXC1Q12948 RNU6-271P-201ENST00000363858 105 ntBASIC4.32□□□□□ -1.72
FOXC1Q12948 SNORA9-201ENST00000384215 133 ntBASIC4.32□□□□□ -1.72
FOXC1Q12948 SNORA5.1-201ENST00000384275 131 ntBASIC4.32□□□□□ -1.72
FOXC1Q12948 RNU6-242P-201ENST00000384359 107 ntBASIC4.32□□□□□ -1.72
FOXC1Q12948 MIR491-201ENST00000384877 84 ntBASIC4.32□□□□□ -1.72
FOXC1Q12948 RPL21P65-201ENST00000406094 466 ntBASIC4.32□□□□□ -1.72
FOXC1Q12948 AC093578.1-201ENST00000415219 368 ntBASIC4.32□□□□□ -1.72
FOXC1Q12948 GNG5P5-201ENST00000420444 220 ntBASIC4.32□□□□□ -1.72
FOXC1Q12948 AC018634.1-201ENST00000437554 401 ntBASIC4.32□□□□□ -1.72
FOXC1Q12948 AL133547.1-201ENST00000448546 220 ntBASIC4.32□□□□□ -1.72
FOXC1Q12948 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXC1Q12948 AC093663.1-201ENST00000497190 394 ntBASIC4.32□□□□□ -1.72
FOXC1Q12948 SNORA74D-201ENST00000516404 141 ntBASIC4.32□□□□□ -1.72
FOXC1Q12948 RNU7-149P-201ENST00000516739 59 ntBASIC4.32□□□□□ -1.72
FOXC1Q12948 SCARNA15-202ENST00000516881 127 ntBASIC4.32□□□□□ -1.72
FOXC1Q12948 AC136777.2-201ENST00000522979 358 ntBASIC4.32□□□□□ -1.72
FOXC1Q12948 AC019288.1-201ENST00000557918 224 ntBASIC4.32□□□□□ -1.72
FOXC1Q12948 MIR4666B-201ENST00000578142 81 ntBASIC4.32□□□□□ -1.72
FOXC1Q12948 MIR2681-201ENST00000581814 105 ntBASIC4.32□□□□□ -1.72
FOXC1Q12948 IGLL4P-201ENST00000614590 133 ntBASIC4.32□□□□□ -1.72
FOXC1Q12948 MIR6133-201ENST00000617057 108 ntBASIC4.32□□□□□ -1.72
FOXC1Q12948 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXC1Q12948 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXC1Q12948 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXC1Q12948 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXC1Q12948 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXC1Q12948 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
FOXC1Q12948 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
FOXC1Q12948 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
FOXC1Q12948 MIR331-201ENST00000362302 94 ntBASIC4.31□□□□□ -1.72
FOXC1Q12948 RNA5SP453-201ENST00000362503 119 ntBASIC4.31□□□□□ -1.72
FOXC1Q12948 Y_RNA.73-201ENST00000362910 113 ntBASIC4.31□□□□□ -1.72
FOXC1Q12948 RNU6-414P-201ENST00000363705 104 ntBASIC4.31□□□□□ -1.72
FOXC1Q12948 Y_RNA.203-201ENST00000364106 102 ntBASIC4.31□□□□□ -1.72
FOXC1Q12948 Y_RNA.344-201ENST00000365381 112 ntBASIC4.31□□□□□ -1.72
FOXC1Q12948 RNU6-675P-201ENST00000384236 104 ntBASIC4.31□□□□□ -1.72
FOXC1Q12948 SDHCP2-201ENST00000398565 501 ntBASIC4.31□□□□□ -1.72
FOXC1Q12948 AL139095.1-201ENST00000404326 391 ntBASIC4.31□□□□□ -1.72
FOXC1Q12948 RNA5SP511-201ENST00000410487 115 ntBASIC4.31□□□□□ -1.72
FOXC1Q12948 RN7SKP177-201ENST00000410567 355 ntBASIC4.31□□□□□ -1.72
FOXC1Q12948 ATP6V0E1P1-201ENST00000412537 226 ntBASIC4.31□□□□□ -1.72
FOXC1Q12948 AC023449.1-201ENST00000454464 154 ntBASIC4.31□□□□□ -1.72
FOXC1Q12948 SNORA59A-201ENST00000459326 152 ntBASIC4.31□□□□□ -1.72
FOXC1Q12948 RPS29P20-201ENST00000489592 171 ntBASIC4.31□□□□□ -1.72
FOXC1Q12948 AC091826.1-201ENST00000514065 313 ntBASIC4.31□□□□□ -1.72
FOXC1Q12948 RNU2-13P-201ENST00000515909 113 ntBASIC4.31□□□□□ -1.72
FOXC1Q12948 TRAV8-5-201ENST00000537369 341 ntBASIC4.31□□□□□ -1.72
FOXC1Q12948 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.31□□□□□ -1.72
FOXC1Q12948 RN7SL290P-201ENST00000578661 300 ntBASIC4.31□□□□□ -1.72
FOXC1Q12948 AC007179.3-201ENST00000604976 235 ntBASIC4.31□□□□□ -1.72
FOXC1Q12948 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC4.31□□□□□ -1.72
FOXC1Q12948 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.31□□□□□ -1.72
FOXC1Q12948 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
FOXC1Q12948 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXC1Q12948 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXC1Q12948 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXC1Q12948 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.31□□□□□ -1.72
FOXC1Q12948 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
FOXC1Q12948 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
FOXC1Q12948 Y_RNA.796-201ENST00000364268 102 ntBASIC4.3□□□□□ -1.72
FOXC1Q12948 RNU6-1305P-201ENST00000364353 104 ntBASIC4.3□□□□□ -1.72
FOXC1Q12948 Y_RNA.799-201ENST00000364992 102 ntBASIC4.3□□□□□ -1.72
FOXC1Q12948 RNU6-979P-201ENST00000383896 107 ntBASIC4.3□□□□□ -1.72
FOXC1Q12948 RNA5SP187-201ENST00000384400 119 ntBASIC4.3□□□□□ -1.72
FOXC1Q12948 RNA5SP241-201ENST00000391326 114 ntBASIC4.3□□□□□ -1.72
FOXC1Q12948 RNA5SP57-201ENST00000459463 123 ntBASIC4.3□□□□□ -1.72
FOXC1Q12948 RN7SL517P-201ENST00000462240 305 ntBASIC4.3□□□□□ -1.72
FOXC1Q12948 RPS26P48-201ENST00000491713 339 ntBASIC4.3□□□□□ -1.72
FOXC1Q12948 AC145146.1-201ENST00000496370 254 ntBASIC4.3□□□□□ -1.72
FOXC1Q12948 RNU6-63P-201ENST00000516690 95 ntBASIC4.3□□□□□ -1.72
FOXC1Q12948 RNU6-1149P-201ENST00000516810 97 ntBASIC4.3□□□□□ -1.72
FOXC1Q12948 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.3□□□□□ -1.72
FOXC1Q12948 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.3□□□□□ -1.72
FOXC1Q12948 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
FOXC1Q12948 uc_338.13-201ENST00000618243 179 ntBASIC4.3□□□□□ -1.72
FOXC1Q12948 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXC1Q12948 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXC1Q12948 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
FOXC1Q12948 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.3□□□□□ -1.72
FOXC1Q12948 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
FOXC1Q12948 AC093591.2-201ENST00000565254 3843 ntBASIC4.3□□□□□ -1.72
FOXC1Q12948 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
FOXC1Q12948 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
FOXC1Q12948 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
FOXC1Q12948 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
FOXC1Q12948 Y_RNA.213-201ENST00000364178 111 ntBASIC4.29□□□□□ -1.72
FOXC1Q12948 RNA5SP130-201ENST00000364431 114 ntBASIC4.29□□□□□ -1.72
FOXC1Q12948 SNORA4.2-201ENST00000365313 147 ntBASIC4.29□□□□□ -1.72
FOXC1Q12948 RNU6-117P-201ENST00000365415 107 ntBASIC4.29□□□□□ -1.72
FOXC1Q12948 AC245291.1-201ENST00000419501 328 ntBASIC4.29□□□□□ -1.72
FOXC1Q12948 AC099670.2-201ENST00000435130 321 ntBASIC4.29□□□□□ -1.72
FOXC1Q12948 OR9P1P-201ENST00000496431 281 ntBASIC4.29□□□□□ -1.72
FOXC1Q12948 AC010598.1-201ENST00000510378 103 ntBASIC4.29□□□□□ -1.72
FOXC1Q12948 SCARNA23-201ENST00000516060 130 ntBASIC4.29□□□□□ -1.72
FOXC1Q12948 SNORA70.24-201ENST00000517233 118 ntBASIC4.29□□□□□ -1.72
FOXC1Q12948 IGHVIII-67-2-201ENST00000519849 88 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms