Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL391987.6-201ENST00000305671 199 ntBASIC3.03□□□□□ -1.92
CLRN1P58418 MIR30E-201ENST00000362104 92 ntBASIC3.03□□□□□ -1.92
CLRN1P58418 Y_RNA.16-201ENST00000362421 102 ntBASIC3.03□□□□□ -1.92
CLRN1P58418 RNU6-280P-201ENST00000364145 104 ntBASIC3.03□□□□□ -1.92
CLRN1P58418 RNU4-56P-201ENST00000364700 142 ntBASIC3.03□□□□□ -1.92
CLRN1P58418 SNORA14A-201ENST00000364773 135 ntBASIC3.03□□□□□ -1.92
CLRN1P58418 Y_RNA.552-201ENST00000384665 112 ntBASIC3.03□□□□□ -1.92
CLRN1P58418 MIR767-201ENST00000390228 109 ntBASIC3.03□□□□□ -1.92
CLRN1P58418 Y_RNA.581-201ENST00000391017 97 ntBASIC3.03□□□□□ -1.92
CLRN1P58418 U3.26-201ENST00000391236 204 ntBASIC3.03□□□□□ -1.92
CLRN1P58418 SNORA48.7-201ENST00000391302 135 ntBASIC3.03□□□□□ -1.92
CLRN1P58418 MIR208B-201ENST00000401172 77 ntBASIC3.03□□□□□ -1.92
CLRN1P58418 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.03□□□□□ -1.92
CLRN1P58418 HMGN2P31-201ENST00000432430 273 ntBASIC3.03□□□□□ -1.92
CLRN1P58418 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.03□□□□□ -1.92
CLRN1P58418 HMGN2P20-201ENST00000437531 273 ntBASIC3.03□□□□□ -1.92
CLRN1P58418 AC010095.1-201ENST00000443543 144 ntBASIC3.03□□□□□ -1.92
CLRN1P58418 AC112771.1-201ENST00000463581 102 ntBASIC3.03□□□□□ -1.92
CLRN1P58418 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.03□□□□□ -1.92
CLRN1P58418 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.03□□□□□ -1.92
CLRN1P58418 AC026403.1-201ENST00000518938 295 ntBASIC3.03□□□□□ -1.92
CLRN1P58418 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.03□□□□□ -1.92
CLRN1P58418 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.03□□□□□ -1.92
CLRN1P58418 AL034555.1-201ENST00000604816 211 ntBASIC3.03□□□□□ -1.92
CLRN1P58418 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.03□□□□□ -1.92
CLRN1P58418 AC039056.2-201ENST00000622261 511 ntBASIC3.03□□□□□ -1.92
CLRN1P58418 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
CLRN1P58418 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.03□□□□□ -1.92
CLRN1P58418 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
CLRN1P58418 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
CLRN1P58418 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CLRN1P58418 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLRN1P58418 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CLRN1P58418 RNU4-35P-201ENST00000362588 141 ntBASIC3.02□□□□□ -1.93
CLRN1P58418 RNU6-1026P-201ENST00000384465 108 ntBASIC3.02□□□□□ -1.93
CLRN1P58418 Y_RNA.541-201ENST00000384640 113 ntBASIC3.02□□□□□ -1.93
CLRN1P58418 MIR200C-201ENST00000384980 68 ntBASIC3.02□□□□□ -1.93
CLRN1P58418 MIR591-201ENST00000385290 95 ntBASIC3.02□□□□□ -1.93
CLRN1P58418 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CLRN1P58418 PTMAP2-201ENST00000397627 327 ntBASIC3.02□□□□□ -1.93
CLRN1P58418 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CLRN1P58418 CBX3P9-201ENST00000402326 552 ntBASIC3.02□□□□□ -1.93
CLRN1P58418 AC017079.2-201ENST00000416102 485 ntBASIC3.02□□□□□ -1.93
CLRN1P58418 AIMP1P2-201ENST00000425294 312 ntBASIC3.02□□□□□ -1.93
CLRN1P58418 AC112220.1-201ENST00000434628 355 ntBASIC3.02□□□□□ -1.93
CLRN1P58418 AC005002.2-201ENST00000438228 269 ntBASIC3.02□□□□□ -1.93
CLRN1P58418 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.02□□□□□ -1.93
CLRN1P58418 snoU13.14-201ENST00000459372 104 ntBASIC3.02□□□□□ -1.93
CLRN1P58418 AC007215.1-201ENST00000464893 276 ntBASIC3.02□□□□□ -1.93
CLRN1P58418 RPL26P26-201ENST00000480251 434 ntBASIC3.02□□□□□ -1.93
CLRN1P58418 RPL21P129-201ENST00000491732 478 ntBASIC3.02□□□□□ -1.93
CLRN1P58418 SNORA25.14-201ENST00000516481 132 ntBASIC3.02□□□□□ -1.93
CLRN1P58418 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.02□□□□□ -1.93
CLRN1P58418 NDUFB9P3-201ENST00000521269 501 ntBASIC3.02□□□□□ -1.93
CLRN1P58418 MIR3923-201ENST00000579521 83 ntBASIC3.02□□□□□ -1.93
CLRN1P58418 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.02□□□□□ -1.93
CLRN1P58418 U3.45-201ENST00000607547 219 ntBASIC3.02□□□□□ -1.93
CLRN1P58418 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLRN1P58418 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLRN1P58418 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.01□□□□□ -1.93
CLRN1P58418 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLRN1P58418 MIR335-201ENST00000362173 94 ntBASIC3.01□□□□□ -1.93
CLRN1P58418 SNORD81.1-201ENST00000363064 77 ntBASIC3.01□□□□□ -1.93
CLRN1P58418 RNA5SP197-201ENST00000363357 119 ntBASIC3.01□□□□□ -1.93
CLRN1P58418 RNU1-105P-201ENST00000363470 161 ntBASIC3.01□□□□□ -1.93
CLRN1P58418 RNU6-799P-201ENST00000363567 107 ntBASIC3.01□□□□□ -1.93
CLRN1P58418 RNU6-378P-201ENST00000384324 107 ntBASIC3.01□□□□□ -1.93
CLRN1P58418 RNU6-102P-201ENST00000384485 104 ntBASIC3.01□□□□□ -1.93
CLRN1P58418 MIR23B-201ENST00000384832 97 ntBASIC3.01□□□□□ -1.93
CLRN1P58418 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLRN1P58418 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.01□□□□□ -1.93
CLRN1P58418 RN7SKP58-201ENST00000411010 305 ntBASIC3.01□□□□□ -1.93
CLRN1P58418 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.01□□□□□ -1.93
CLRN1P58418 GOT2P5-201ENST00000433995 546 ntBASIC3.01□□□□□ -1.93
CLRN1P58418 AC006539.3-201ENST00000454258 129 ntBASIC3.01□□□□□ -1.93
CLRN1P58418 RPS27P26-201ENST00000494583 239 ntBASIC3.01□□□□□ -1.93
CLRN1P58418 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.01□□□□□ -1.93
CLRN1P58418 RNU6-496P-201ENST00000516145 99 ntBASIC3.01□□□□□ -1.93
CLRN1P58418 RNU6-1338P-201ENST00000516328 91 ntBASIC3.01□□□□□ -1.93
CLRN1P58418 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.01□□□□□ -1.93
CLRN1P58418 AC074050.1-201ENST00000563247 211 ntBASIC3.01□□□□□ -1.93
CLRN1P58418 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.01□□□□□ -1.93
CLRN1P58418 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.01□□□□□ -1.93
CLRN1P58418 AC010900.2-201ENST00000604508 210 ntBASIC3.01□□□□□ -1.93
CLRN1P58418 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.01□□□□□ -1.93
CLRN1P58418 AC010999.1-201ENST00000611856 324 ntBASIC3.01□□□□□ -1.93
CLRN1P58418 AL442067.1-201ENST00000613261 223 ntBASIC3.01□□□□□ -1.93
CLRN1P58418 AC005520.5-201ENST00000613926 164 ntBASIC3.01□□□□□ -1.93
CLRN1P58418 AC012442.3-202ENST00000636742 206 ntBASIC3.01□□□□□ -1.93
CLRN1P58418 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.01□□□□□ -1.93
CLRN1P58418 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLRN1P58418 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3□□□□□ -1.93
CLRN1P58418 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLRN1P58418 RNA5SP50-201ENST00000363731 107 ntBASIC3□□□□□ -1.93
CLRN1P58418 RNU6-961P-201ENST00000363893 105 ntBASIC3□□□□□ -1.93
CLRN1P58418 SNORD63-201ENST00000384262 68 ntBASIC3□□□□□ -1.93
CLRN1P58418 Y_RNA.478-201ENST00000384358 107 ntBASIC3□□□□□ -1.93
CLRN1P58418 MIR186-201ENST00000384988 86 ntBASIC3□□□□□ -1.93
CLRN1P58418 MIR134-201ENST00000385258 73 ntBASIC3□□□□□ -1.93
CLRN1P58418 SNORD17-201ENST00000390930 237 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms