Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 Z82205.1-201ENST00000428456 297 ntBASIC2.06□□□□□ -2.08
HMGCS2P54868 RPL30P4-201ENST00000429309 333 ntBASIC2.06□□□□□ -2.08
HMGCS2P54868 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.06□□□□□ -2.08
HMGCS2P54868 RBMX2P4-201ENST00000441256 376 ntBASIC2.06□□□□□ -2.08
HMGCS2P54868 RNU7-138P-201ENST00000459479 64 ntBASIC2.06□□□□□ -2.08
HMGCS2P54868 RPL22P13-201ENST00000493291 347 ntBASIC2.06□□□□□ -2.08
HMGCS2P54868 AF213884.2-201ENST00000510417 903 ntBASIC2.06□□□□□ -2.08
HMGCS2P54868 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.06□□□□□ -2.08
HMGCS2P54868 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.06□□□□□ -2.08
HMGCS2P54868 AC021646.1-201ENST00000605469 484 ntBASIC2.06□□□□□ -2.08
HMGCS2P54868 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
HMGCS2P54868 AC006504.8-201ENST00000621046 635 ntBASIC2.06□□□□□ -2.08
HMGCS2P54868 KPNA2P1-201ENST00000458289 1591 ntBASIC2.06□□□□□ -2.08
HMGCS2P54868 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HMGCS2P54868 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
HMGCS2P54868 RNU6-428P-201ENST00000362942 107 ntBASIC2.05□□□□□ -2.08
HMGCS2P54868 RNU6-254P-201ENST00000363377 107 ntBASIC2.05□□□□□ -2.08
HMGCS2P54868 RNU6-1283P-201ENST00000365314 105 ntBASIC2.05□□□□□ -2.08
HMGCS2P54868 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
HMGCS2P54868 RNA5SP118-201ENST00000410385 109 ntBASIC2.05□□□□□ -2.08
HMGCS2P54868 RN7SKP158-201ENST00000410453 326 ntBASIC2.05□□□□□ -2.08
HMGCS2P54868 MTND1P2-201ENST00000430604 821 ntBASIC2.05□□□□□ -2.08
HMGCS2P54868 AL645568.3-201ENST00000433683 316 ntBASIC2.05□□□□□ -2.08
HMGCS2P54868 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.05□□□□□ -2.08
HMGCS2P54868 AC007969.2-201ENST00000441891 191 ntBASIC2.05□□□□□ -2.08
HMGCS2P54868 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGCS2P54868 AC124916.1-201ENST00000444020 547 ntBASIC2.05□□□□□ -2.08
HMGCS2P54868 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGCS2P54868 AC079140.5-201ENST00000507882 310 ntBASIC2.05□□□□□ -2.08
HMGCS2P54868 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.05□□□□□ -2.08
HMGCS2P54868 SNORA19.2-201ENST00000516013 114 ntBASIC2.05□□□□□ -2.08
HMGCS2P54868 RNU6-358P-201ENST00000516564 75 ntBASIC2.05□□□□□ -2.08
HMGCS2P54868 AC069113.1-201ENST00000517763 267 ntBASIC2.05□□□□□ -2.08
HMGCS2P54868 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.05□□□□□ -2.08
HMGCS2P54868 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGCS2P54868 AL133241.1-201ENST00000556832 487 ntBASIC2.05□□□□□ -2.08
HMGCS2P54868 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGCS2P54868 RNU6-91P-201ENST00000607774 107 ntBASIC2.05□□□□□ -2.08
HMGCS2P54868 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.05□□□□□ -2.08
HMGCS2P54868 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.05□□□□□ -2.08
HMGCS2P54868 MIR3529-201ENST00000637713 78 ntBASIC2.05□□□□□ -2.08
HMGCS2P54868 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.05□□□□□ -2.08
HMGCS2P54868 HAUS6P2-201ENST00000433254 2404 ntBASIC2.05□□□□□ -2.08
HMGCS2P54868 Y_RNA.157-201ENST00000363638 102 ntBASIC2.04□□□□□ -2.08
HMGCS2P54868 RNU6-105P-201ENST00000363909 104 ntBASIC2.04□□□□□ -2.08
HMGCS2P54868 SNORA3A-201ENST00000364113 130 ntBASIC2.04□□□□□ -2.08
HMGCS2P54868 RNA5SP125-201ENST00000364843 120 ntBASIC2.04□□□□□ -2.08
HMGCS2P54868 RNU6-336P-201ENST00000364891 107 ntBASIC2.04□□□□□ -2.08
HMGCS2P54868 RNU6-487P-201ENST00000365430 104 ntBASIC2.04□□□□□ -2.08
HMGCS2P54868 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HMGCS2P54868 RPS29P13-201ENST00000402041 169 ntBASIC2.04□□□□□ -2.08
HMGCS2P54868 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.04□□□□□ -2.08
HMGCS2P54868 AP1B1P2-201ENST00000416196 106 ntBASIC2.04□□□□□ -2.08
HMGCS2P54868 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.04□□□□□ -2.08
HMGCS2P54868 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.04□□□□□ -2.08
HMGCS2P54868 USP9YP28-201ENST00000435142 589 ntBASIC2.04□□□□□ -2.08
HMGCS2P54868 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HMGCS2P54868 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.04□□□□□ -2.08
HMGCS2P54868 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.04□□□□□ -2.08
HMGCS2P54868 RNU6-1314P-201ENST00000517139 104 ntBASIC2.04□□□□□ -2.08
HMGCS2P54868 RNU6-323P-201ENST00000521915 107 ntBASIC2.04□□□□□ -2.08
HMGCS2P54868 AF235103.2-201ENST00000525753 346 ntBASIC2.04□□□□□ -2.08
HMGCS2P54868 AC079598.5-201ENST00000547460 117 ntBASIC2.04□□□□□ -2.08
HMGCS2P54868 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.04□□□□□ -2.08
HMGCS2P54868 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.04□□□□□ -2.08
HMGCS2P54868 PSMA3P-201ENST00000555485 635 ntBASIC2.04□□□□□ -2.08
HMGCS2P54868 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.04□□□□□ -2.08
HMGCS2P54868 AC060780.3-201ENST00000589464 80 ntBASIC2.04□□□□□ -2.08
HMGCS2P54868 AL357078.3-201ENST00000607528 618 ntBASIC2.04□□□□□ -2.08
HMGCS2P54868 AC064836.2-201ENST00000609491 462 ntBASIC2.04□□□□□ -2.08
HMGCS2P54868 AC097372.5-201ENST00000623665 376 ntBASIC2.04□□□□□ -2.08
HMGCS2P54868 AC100810.6-201ENST00000638068 285 ntBASIC2.04□□□□□ -2.08
HMGCS2P54868 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
HMGCS2P54868 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
HMGCS2P54868 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.04□□□□□ -2.08
HMGCS2P54868 SNORD56.1-201ENST00000362913 68 ntBASIC2.03□□□□□ -2.08
HMGCS2P54868 RNU1-72P-201ENST00000362976 153 ntBASIC2.03□□□□□ -2.08
HMGCS2P54868 Y_RNA.226-201ENST00000364337 114 ntBASIC2.03□□□□□ -2.08
HMGCS2P54868 SNORA16.1-201ENST00000364597 132 ntBASIC2.03□□□□□ -2.08
HMGCS2P54868 RNU6-827P-201ENST00000365553 106 ntBASIC2.03□□□□□ -2.08
HMGCS2P54868 Y_RNA.530-201ENST00000384587 101 ntBASIC2.03□□□□□ -2.08
HMGCS2P54868 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.03□□□□□ -2.08
HMGCS2P54868 NDUFA5P4-201ENST00000436704 385 ntBASIC2.03□□□□□ -2.08
HMGCS2P54868 AC243964.1-201ENST00000441814 261 ntBASIC2.03□□□□□ -2.08
HMGCS2P54868 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.03□□□□□ -2.08
HMGCS2P54868 AC006026.2-201ENST00000457376 180 ntBASIC2.03□□□□□ -2.08
HMGCS2P54868 AC007547.1-201ENST00000462177 490 ntBASIC2.03□□□□□ -2.08
HMGCS2P54868 AC092436.3-201ENST00000511788 257 ntBASIC2.03□□□□□ -2.08
HMGCS2P54868 SNORA25.11-201ENST00000515935 105 ntBASIC2.03□□□□□ -2.08
HMGCS2P54868 RNU6-377P-201ENST00000515965 102 ntBASIC2.03□□□□□ -2.08
HMGCS2P54868 AC109479.2-201ENST00000517842 174 ntBASIC2.03□□□□□ -2.08
HMGCS2P54868 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.03□□□□□ -2.08
HMGCS2P54868 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.03□□□□□ -2.08
HMGCS2P54868 AC087854.1-201ENST00000519706 414 ntBASIC2.03□□□□□ -2.08
HMGCS2P54868 AC121758.2-201ENST00000553271 193 ntBASIC2.03□□□□□ -2.08
HMGCS2P54868 AC103996.1-201ENST00000555468 102 ntBASIC2.03□□□□□ -2.08
HMGCS2P54868 MIR5694-201ENST00000581190 76 ntBASIC2.03□□□□□ -2.08
HMGCS2P54868 AC090897.2-201ENST00000581715 130 ntBASIC2.03□□□□□ -2.08
HMGCS2P54868 MIR502-201ENST00000606349 86 ntBASIC2.03□□□□□ -2.08
HMGCS2P54868 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms