Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SPTLC1O15269 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SPTLC1O15269 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SPTLC1O15269 RNU6-915P-201ENST00000364943 103 ntBASIC4.67□□□□□ -1.66
SPTLC1O15269 RNU6-728P-201ENST00000365375 104 ntBASIC4.67□□□□□ -1.66
SPTLC1O15269 RNA5SP366-201ENST00000365454 123 ntBASIC4.67□□□□□ -1.66
SPTLC1O15269 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SPTLC1O15269 Y_RNA.521-201ENST00000384560 114 ntBASIC4.67□□□□□ -1.66
SPTLC1O15269 AL158823.1-201ENST00000418441 478 ntBASIC4.67□□□□□ -1.66
SPTLC1O15269 CYCSP49-201ENST00000420810 319 ntBASIC4.67□□□□□ -1.66
SPTLC1O15269 HSPE1P21-201ENST00000438283 308 ntBASIC4.67□□□□□ -1.66
SPTLC1O15269 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.67□□□□□ -1.66
SPTLC1O15269 RNU7-23P-201ENST00000459465 62 ntBASIC4.67□□□□□ -1.66
SPTLC1O15269 RPL35AP15-201ENST00000468042 339 ntBASIC4.67□□□□□ -1.66
SPTLC1O15269 RNA5SP143-201ENST00000516936 115 ntBASIC4.67□□□□□ -1.66
SPTLC1O15269 AC007546.2-201ENST00000623996 360 ntBASIC4.67□□□□□ -1.66
SPTLC1O15269 MIR3653-201ENST00000625572 110 ntBASIC4.67□□□□□ -1.66
SPTLC1O15269 AC140479.6-201ENST00000633535 357 ntBASIC4.67□□□□□ -1.66
SPTLC1O15269 AL773545.4-201ENST00000637262 310 ntBASIC4.67□□□□□ -1.66
SPTLC1O15269 AL513478.4-201ENST00000641636 310 ntBASIC4.67□□□□□ -1.66
SPTLC1O15269 SCN1A-220ENST00000641603 12506 ntBASIC4.67□□□□□ -1.66
SPTLC1O15269 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
SPTLC1O15269 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
SPTLC1O15269 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.67□□□□□ -1.66
SPTLC1O15269 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.66□□□□□ -1.66
SPTLC1O15269 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
SPTLC1O15269 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SPTLC1O15269 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SPTLC1O15269 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SPTLC1O15269 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SPTLC1O15269 RNA5SP307-201ENST00000362863 116 ntBASIC4.66□□□□□ -1.66
SPTLC1O15269 RNU6-198P-201ENST00000384258 104 ntBASIC4.66□□□□□ -1.66
SPTLC1O15269 MIR708-201ENST00000390708 88 ntBASIC4.66□□□□□ -1.66
SPTLC1O15269 AL606845.1-201ENST00000404881 255 ntBASIC4.66□□□□□ -1.66
SPTLC1O15269 SNORA74C-2-201ENST00000411179 201 ntBASIC4.66□□□□□ -1.66
SPTLC1O15269 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.66□□□□□ -1.66
SPTLC1O15269 HMGN2P20-201ENST00000437531 273 ntBASIC4.66□□□□□ -1.66
SPTLC1O15269 MIR3646-201ENST00000578301 84 ntBASIC4.66□□□□□ -1.66
SPTLC1O15269 MIR3944-201ENST00000581277 108 ntBASIC4.66□□□□□ -1.66
SPTLC1O15269 RPL17P51-201ENST00000605218 238 ntBASIC4.66□□□□□ -1.66
SPTLC1O15269 AC025754.2-201ENST00000606491 432 ntBASIC4.66□□□□□ -1.66
SPTLC1O15269 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SPTLC1O15269 MAPK10-303ENST00000641324 3959 ntBASIC4.66□□□□□ -1.66
SPTLC1O15269 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SPTLC1O15269 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.66□□□□□ -1.66
SPTLC1O15269 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.66□□□□□ -1.66
SPTLC1O15269 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
SPTLC1O15269 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SPTLC1O15269 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SPTLC1O15269 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.65□□□□□ -1.66
SPTLC1O15269 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SPTLC1O15269 SPRR2C-201ENST00000290702 219 ntBASIC4.65□□□□□ -1.67
SPTLC1O15269 Y_RNA.229-201ENST00000364347 113 ntBASIC4.65□□□□□ -1.67
SPTLC1O15269 Y_RNA.251-201ENST00000364551 99 ntBASIC4.65□□□□□ -1.67
SPTLC1O15269 RNU1-57P-201ENST00000384491 166 ntBASIC4.65□□□□□ -1.67
SPTLC1O15269 MIR548B-201ENST00000385247 97 ntBASIC4.65□□□□□ -1.67
SPTLC1O15269 RN7SL542P-201ENST00000467147 294 ntBASIC4.65□□□□□ -1.67
SPTLC1O15269 RNA5SP49-201ENST00000516450 115 ntBASIC4.65□□□□□ -1.67
SPTLC1O15269 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SPTLC1O15269 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SPTLC1O15269 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SPTLC1O15269 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.65□□□□□ -1.67
SPTLC1O15269 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SPTLC1O15269 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SPTLC1O15269 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.65□□□□□ -1.67
SPTLC1O15269 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SPTLC1O15269 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SPTLC1O15269 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SPTLC1O15269 AC010733.2-201ENST00000589496 5702 ntBASIC4.64□□□□□ -1.67
SPTLC1O15269 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.64□□□□□ -1.67
SPTLC1O15269 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SPTLC1O15269 RNU6-1305P-201ENST00000364353 104 ntBASIC4.64□□□□□ -1.67
SPTLC1O15269 SNORA25.7-201ENST00000364375 127 ntBASIC4.64□□□□□ -1.67
SPTLC1O15269 SNORA67.2-201ENST00000384300 149 ntBASIC4.64□□□□□ -1.67
SPTLC1O15269 RNA5SP372-201ENST00000390836 115 ntBASIC4.64□□□□□ -1.67
SPTLC1O15269 RNU6-750P-201ENST00000390946 107 ntBASIC4.64□□□□□ -1.67
SPTLC1O15269 SNORA48.5-201ENST00000391143 135 ntBASIC4.64□□□□□ -1.67
SPTLC1O15269 RNA5SP239-201ENST00000410218 129 ntBASIC4.64□□□□□ -1.67
SPTLC1O15269 AL157831.1-201ENST00000426134 473 ntBASIC4.64□□□□□ -1.67
SPTLC1O15269 RPL23AP83-201ENST00000434984 473 ntBASIC4.64□□□□□ -1.67
SPTLC1O15269 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.64□□□□□ -1.67
SPTLC1O15269 RN7SL812P-201ENST00000493791 279 ntBASIC4.64□□□□□ -1.67
SPTLC1O15269 PARP4P3-201ENST00000510265 317 ntBASIC4.64□□□□□ -1.67
SPTLC1O15269 AP000867.2-201ENST00000532468 320 ntBASIC4.64□□□□□ -1.67
SPTLC1O15269 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SPTLC1O15269 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.64□□□□□ -1.67
SPTLC1O15269 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SPTLC1O15269 MIR3914-2-201ENST00000637339 95 ntBASIC4.64□□□□□ -1.67
SPTLC1O15269 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.64□□□□□ -1.67
SPTLC1O15269 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SPTLC1O15269 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SPTLC1O15269 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.64□□□□□ -1.67
SPTLC1O15269 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SPTLC1O15269 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SPTLC1O15269 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.64□□□□□ -1.67
SPTLC1O15269 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SPTLC1O15269 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SPTLC1O15269 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.63□□□□□ -1.67
SPTLC1O15269 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SPTLC1O15269 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms