Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 CD99P1-205ENST00000527459 561 ntBASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 AC008694.1-202ENST00000636953 945 ntBASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 AC066615.1-201ENST00000640911 628 ntBASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 AC116351.2-201ENST00000606540 1585 ntBASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 LINC00896-202ENST00000609602 2128 ntBASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 NCF1B-203ENST00000435988 1254 ntBASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 AC068338.2-201ENST00000563278 1430 ntBASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGB1Q9Y5G3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 MIR663A-201ENST00000385250 93 ntBASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB1Q9Y5G3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGB1Q9Y5G3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGB1Q9Y5G3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGB1Q9Y5G3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGB1Q9Y5G3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGB1Q9Y5G3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.33■□□□□ 0.37
PCDHGB1Q9Y5G3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGB1Q9Y5G3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.33■□□□□ 0.37
PCDHGB1Q9Y5G3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGB1Q9Y5G3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGB1Q9Y5G3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms