Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.95■□□□□ 0.46
ATG4BQ9Y4P1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.95■□□□□ 0.46
ATG4BQ9Y4P1 SLC25A1P4-201ENST00000567977 778 ntBASIC17.95■□□□□ 0.46
ATG4BQ9Y4P1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATG4BQ9Y4P1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.95■□□□□ 0.46
ATG4BQ9Y4P1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.95■□□□□ 0.46
ATG4BQ9Y4P1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.95■□□□□ 0.46
ATG4BQ9Y4P1 DGCR10-201ENST00000609839 495 ntBASIC17.95■□□□□ 0.46
ATG4BQ9Y4P1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
ATG4BQ9Y4P1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATG4BQ9Y4P1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.95■□□□□ 0.46
ATG4BQ9Y4P1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATG4BQ9Y4P1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.95■□□□□ 0.46
ATG4BQ9Y4P1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATG4BQ9Y4P1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATG4BQ9Y4P1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATG4BQ9Y4P1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.95■□□□□ 0.46
ATG4BQ9Y4P1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.95■□□□□ 0.46
ATG4BQ9Y4P1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 AC096733.2-201ENST00000609937 1394 ntBASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 AC004408.2-201ENST00000623613 2777 ntBASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 AC097488.1-201ENST00000507834 756 ntBASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 KRT17P2-201ENST00000300992 1314 ntBASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATG4BQ9Y4P1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 RBM17P1-201ENST00000453646 1190 ntBASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.93■□□□□ 0.46
ATG4BQ9Y4P1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATG4BQ9Y4P1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATG4BQ9Y4P1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATG4BQ9Y4P1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATG4BQ9Y4P1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.92■□□□□ 0.46
ATG4BQ9Y4P1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.92■□□□□ 0.46
ATG4BQ9Y4P1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATG4BQ9Y4P1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
ATG4BQ9Y4P1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ATG4BQ9Y4P1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.92■□□□□ 0.46
ATG4BQ9Y4P1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.92■□□□□ 0.46
ATG4BQ9Y4P1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.92■□□□□ 0.46
ATG4BQ9Y4P1 MFAP1P1-201ENST00000442257 1255 ntBASIC17.92■□□□□ 0.46
ATG4BQ9Y4P1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.92■□□□□ 0.46
ATG4BQ9Y4P1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.92■□□□□ 0.46
ATG4BQ9Y4P1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATG4BQ9Y4P1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.92■□□□□ 0.46
ATG4BQ9Y4P1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
ATG4BQ9Y4P1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATG4BQ9Y4P1 AC093503.3-201ENST00000624917 2352 ntBASIC17.92■□□□□ 0.46
ATG4BQ9Y4P1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.92■□□□□ 0.46
ATG4BQ9Y4P1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.92■□□□□ 0.46
ATG4BQ9Y4P1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATG4BQ9Y4P1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.91■□□□□ 0.46
ATG4BQ9Y4P1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ATG4BQ9Y4P1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATG4BQ9Y4P1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.91■□□□□ 0.46
ATG4BQ9Y4P1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms