Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP15Q9Y4E8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
USP15Q9Y4E8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP15Q9Y4E8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
USP15Q9Y4E8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP15Q9Y4E8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.43■□□□□ 0.86
USP15Q9Y4E8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP15Q9Y4E8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.43■□□□□ 0.86
USP15Q9Y4E8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.43■□□□□ 0.86
USP15Q9Y4E8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP15Q9Y4E8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP15Q9Y4E8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP15Q9Y4E8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP15Q9Y4E8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
USP15Q9Y4E8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.42■□□□□ 0.86
USP15Q9Y4E8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP15Q9Y4E8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP15Q9Y4E8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.42■□□□□ 0.86
USP15Q9Y4E8 AL353719.1-201ENST00000566847 864 ntBASIC20.42■□□□□ 0.86
USP15Q9Y4E8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP15Q9Y4E8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
USP15Q9Y4E8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP15Q9Y4E8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.42■□□□□ 0.86
USP15Q9Y4E8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP15Q9Y4E8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
USP15Q9Y4E8 KRT16P6-202ENST00000425692 1426 ntBASIC20.42■□□□□ 0.86
USP15Q9Y4E8 AC125437.2-201ENST00000625180 2167 ntBASIC20.42■□□□□ 0.86
USP15Q9Y4E8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.42■□□□□ 0.86
USP15Q9Y4E8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.42■□□□□ 0.86
USP15Q9Y4E8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP15Q9Y4E8 AL158211.5-201ENST00000623583 2518 ntBASIC20.42■□□□□ 0.86
USP15Q9Y4E8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP15Q9Y4E8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP15Q9Y4E8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP15Q9Y4E8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.41■□□□□ 0.86
USP15Q9Y4E8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
USP15Q9Y4E8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
USP15Q9Y4E8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP15Q9Y4E8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP15Q9Y4E8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP15Q9Y4E8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP15Q9Y4E8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.41■□□□□ 0.86
USP15Q9Y4E8 KRT18P38-201ENST00000449496 1282 ntBASIC20.41■□□□□ 0.86
USP15Q9Y4E8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.41■□□□□ 0.86
USP15Q9Y4E8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP15Q9Y4E8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.41■□□□□ 0.86
USP15Q9Y4E8 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
USP15Q9Y4E8 AC008622.2-201ENST00000617006 1229 ntBASIC20.41■□□□□ 0.86
USP15Q9Y4E8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.41■□□□□ 0.86
USP15Q9Y4E8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP15Q9Y4E8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP15Q9Y4E8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP15Q9Y4E8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP15Q9Y4E8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP15Q9Y4E8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
USP15Q9Y4E8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 PRSS44-201ENST00000515154 1146 ntBASIC20.4■□□□□ 0.86
USP15Q9Y4E8 VENTXP5-201ENST00000523979 775 ntBASIC20.4■□□□□ 0.86
USP15Q9Y4E8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.4■□□□□ 0.86
USP15Q9Y4E8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 AC012313.10-201ENST00000623509 926 ntBASIC20.4■□□□□ 0.86
USP15Q9Y4E8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP15Q9Y4E8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
USP15Q9Y4E8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.39■□□□□ 0.86
USP15Q9Y4E8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.39■□□□□ 0.86
USP15Q9Y4E8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
USP15Q9Y4E8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.39■□□□□ 0.86
USP15Q9Y4E8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
USP15Q9Y4E8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
USP15Q9Y4E8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
USP15Q9Y4E8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
USP15Q9Y4E8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.39■□□□□ 0.86
USP15Q9Y4E8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.39■□□□□ 0.86
USP15Q9Y4E8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.39■□□□□ 0.85
USP15Q9Y4E8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
USP15Q9Y4E8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
USP15Q9Y4E8 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP15Q9Y4E8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms