Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 B3GAT3P1-201ENST00000471720 806 ntBASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 AP005242.2-201ENST00000580065 1175 ntBASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
FNDC3AQ9Y2H6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FNDC3AQ9Y2H6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.36■□□□□ 0.69
FNDC3AQ9Y2H6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
FNDC3AQ9Y2H6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
FNDC3AQ9Y2H6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FNDC3AQ9Y2H6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FNDC3AQ9Y2H6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FNDC3AQ9Y2H6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FNDC3AQ9Y2H6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.36■□□□□ 0.69
FNDC3AQ9Y2H6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.36■□□□□ 0.69
FNDC3AQ9Y2H6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FNDC3AQ9Y2H6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.36■□□□□ 0.69
FNDC3AQ9Y2H6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FNDC3AQ9Y2H6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FNDC3AQ9Y2H6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FNDC3AQ9Y2H6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
FNDC3AQ9Y2H6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FNDC3AQ9Y2H6 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
FNDC3AQ9Y2H6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.36■□□□□ 0.69
FNDC3AQ9Y2H6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.35■□□□□ 0.69
FNDC3AQ9Y2H6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
FNDC3AQ9Y2H6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FNDC3AQ9Y2H6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FNDC3AQ9Y2H6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
FNDC3AQ9Y2H6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FNDC3AQ9Y2H6 ZNF815P-204ENST00000434898 1737 ntBASIC19.35■□□□□ 0.69
FNDC3AQ9Y2H6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.35■□□□□ 0.69
FNDC3AQ9Y2H6 AC011506.1-201ENST00000474329 610 ntBASIC19.35■□□□□ 0.69
FNDC3AQ9Y2H6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.35■□□□□ 0.69
FNDC3AQ9Y2H6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.35■□□□□ 0.69
FNDC3AQ9Y2H6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.35■□□□□ 0.69
FNDC3AQ9Y2H6 EGLN1P1-201ENST00000531623 762 ntBASIC19.35■□□□□ 0.69
FNDC3AQ9Y2H6 DGCR10-201ENST00000609839 495 ntBASIC19.35■□□□□ 0.69
FNDC3AQ9Y2H6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
FNDC3AQ9Y2H6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FNDC3AQ9Y2H6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.35■□□□□ 0.69
FNDC3AQ9Y2H6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FNDC3AQ9Y2H6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.35■□□□□ 0.69
FNDC3AQ9Y2H6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FNDC3AQ9Y2H6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FNDC3AQ9Y2H6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
FNDC3AQ9Y2H6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FNDC3AQ9Y2H6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FNDC3AQ9Y2H6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FNDC3AQ9Y2H6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.34■□□□□ 0.69
FNDC3AQ9Y2H6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FNDC3AQ9Y2H6 TSPY14P-201ENST00000303979 915 ntBASIC19.34■□□□□ 0.69
FNDC3AQ9Y2H6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FNDC3AQ9Y2H6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FNDC3AQ9Y2H6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.34■□□□□ 0.69
FNDC3AQ9Y2H6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.34■□□□□ 0.69
FNDC3AQ9Y2H6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
FNDC3AQ9Y2H6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FNDC3AQ9Y2H6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
FNDC3AQ9Y2H6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FNDC3AQ9Y2H6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
FNDC3AQ9Y2H6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
FNDC3AQ9Y2H6 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FNDC3AQ9Y2H6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FNDC3AQ9Y2H6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
FNDC3AQ9Y2H6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.33■□□□□ 0.69
FNDC3AQ9Y2H6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FNDC3AQ9Y2H6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FNDC3AQ9Y2H6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
FNDC3AQ9Y2H6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
FNDC3AQ9Y2H6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
FNDC3AQ9Y2H6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
FNDC3AQ9Y2H6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
FNDC3AQ9Y2H6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
FNDC3AQ9Y2H6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FNDC3AQ9Y2H6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
FNDC3AQ9Y2H6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
FNDC3AQ9Y2H6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.33■□□□□ 0.68
FNDC3AQ9Y2H6 CRYGFP-201ENST00000418459 633 ntBASIC19.33■□□□□ 0.68
FNDC3AQ9Y2H6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.33■□□□□ 0.68
FNDC3AQ9Y2H6 AC097488.1-201ENST00000507834 756 ntBASIC19.33■□□□□ 0.68
FNDC3AQ9Y2H6 HLA-A-209ENST00000638375 975 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms