Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 AC091390.4-202ENST00000476426 537 ntBASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 AC011298.2-201ENST00000617989 482 ntBASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 AL138781.2-201ENST00000617896 1843 ntBASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS9D1Q9Y2B5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS9D1Q9Y2B5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS9D1Q9Y2B5 FSCN1P1-201ENST00000568912 1481 ntBASIC18.84■□□□□ 0.61
VPS9D1Q9Y2B5 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
VPS9D1Q9Y2B5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS9D1Q9Y2B5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS9D1Q9Y2B5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
VPS9D1Q9Y2B5 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS9D1Q9Y2B5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS9D1Q9Y2B5 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS9D1Q9Y2B5 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
VPS9D1Q9Y2B5 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC18.84■□□□□ 0.61
VPS9D1Q9Y2B5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
VPS9D1Q9Y2B5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS9D1Q9Y2B5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS9D1Q9Y2B5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS9D1Q9Y2B5 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
VPS9D1Q9Y2B5 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.84■□□□□ 0.61
VPS9D1Q9Y2B5 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS9D1Q9Y2B5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS9D1Q9Y2B5 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
VPS9D1Q9Y2B5 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.83■□□□□ 0.61
VPS9D1Q9Y2B5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VPS9D1Q9Y2B5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VPS9D1Q9Y2B5 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VPS9D1Q9Y2B5 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
VPS9D1Q9Y2B5 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.83■□□□□ 0.6
VPS9D1Q9Y2B5 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VPS9D1Q9Y2B5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VPS9D1Q9Y2B5 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
VPS9D1Q9Y2B5 GCSHP5-201ENST00000443090 522 ntBASIC18.83■□□□□ 0.6
VPS9D1Q9Y2B5 FAM207BP-201ENST00000447172 505 ntBASIC18.83■□□□□ 0.6
VPS9D1Q9Y2B5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.83■□□□□ 0.6
VPS9D1Q9Y2B5 AP001002.2-201ENST00000625137 386 ntBASIC18.83■□□□□ 0.6
VPS9D1Q9Y2B5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.83■□□□□ 0.6
VPS9D1Q9Y2B5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
VPS9D1Q9Y2B5 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS9D1Q9Y2B5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS9D1Q9Y2B5 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
VPS9D1Q9Y2B5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.83■□□□□ 0.6
VPS9D1Q9Y2B5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS9D1Q9Y2B5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.83■□□□□ 0.6
VPS9D1Q9Y2B5 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.83■□□□□ 0.6
VPS9D1Q9Y2B5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
VPS9D1Q9Y2B5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VPS9D1Q9Y2B5 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms