Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 AC093484.2-201ENST00000580996 2166 ntBASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 AK4P3-201ENST00000418260 669 ntBASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 SLC25A1P2-201ENST00000430693 912 ntBASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA1Q9UND3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NPIPA1Q9UND3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms