Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42EP3Q9UKI2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CDC42EP3Q9UKI2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CDC42EP3Q9UKI2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDC42EP3Q9UKI2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
CDC42EP3Q9UKI2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CDC42EP3Q9UKI2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CDC42EP3Q9UKI2 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.83■□□□□ 0.12
CDC42EP3Q9UKI2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDC42EP3Q9UKI2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDC42EP3Q9UKI2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CDC42EP3Q9UKI2 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CDC42EP3Q9UKI2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.83■□□□□ 0.12
CDC42EP3Q9UKI2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.83■□□□□ 0.12
CDC42EP3Q9UKI2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.83■□□□□ 0.12
CDC42EP3Q9UKI2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.83■□□□□ 0.12
CDC42EP3Q9UKI2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.83■□□□□ 0.12
CDC42EP3Q9UKI2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
CDC42EP3Q9UKI2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.83■□□□□ 0.12
CDC42EP3Q9UKI2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
CDC42EP3Q9UKI2 AL512408.1-201ENST00000569378 2000 ntBASIC15.83■□□□□ 0.12
CDC42EP3Q9UKI2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDC42EP3Q9UKI2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.83■□□□□ 0.12
CDC42EP3Q9UKI2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
CDC42EP3Q9UKI2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.83■□□□□ 0.12
CDC42EP3Q9UKI2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDC42EP3Q9UKI2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDC42EP3Q9UKI2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 BX323043.1-201ENST00000641006 1765 ntBASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 AL136038.3-201ENST00000561909 1096 ntBASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 AC099778.1-201ENST00000568593 1911 ntBASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 AC018445.3-201ENST00000624177 1945 ntBASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 LETM1P2-201ENST00000597330 2178 ntBASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP3Q9UKI2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CDC42EP3Q9UKI2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42EP3Q9UKI2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42EP3Q9UKI2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CDC42EP3Q9UKI2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42EP3Q9UKI2 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42EP3Q9UKI2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.81■□□□□ 0.12
CDC42EP3Q9UKI2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.81■□□□□ 0.12
CDC42EP3Q9UKI2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.81■□□□□ 0.12
CDC42EP3Q9UKI2 HCG11-201ENST00000411553 5696 ntBASIC15.81■□□□□ 0.12
CDC42EP3Q9UKI2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.81■□□□□ 0.12
CDC42EP3Q9UKI2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42EP3Q9UKI2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.81■□□□□ 0.12
CDC42EP3Q9UKI2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.81■□□□□ 0.12
CDC42EP3Q9UKI2 PRSS44-201ENST00000515154 1146 ntBASIC15.81■□□□□ 0.12
CDC42EP3Q9UKI2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.81■□□□□ 0.12
CDC42EP3Q9UKI2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.81■□□□□ 0.12
CDC42EP3Q9UKI2 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.81■□□□□ 0.12
CDC42EP3Q9UKI2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.81■□□□□ 0.12
CDC42EP3Q9UKI2 AL441883.1-201ENST00000566170 1045 ntBASIC15.81■□□□□ 0.12
CDC42EP3Q9UKI2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.81■□□□□ 0.12
CDC42EP3Q9UKI2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.81■□□□□ 0.12
CDC42EP3Q9UKI2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42EP3Q9UKI2 AL023973.1-201ENST00000624619 620 ntBASIC15.81■□□□□ 0.12
CDC42EP3Q9UKI2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42EP3Q9UKI2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42EP3Q9UKI2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.8■□□□□ 0.12
CDC42EP3Q9UKI2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDC42EP3Q9UKI2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42EP3Q9UKI2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42EP3Q9UKI2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDC42EP3Q9UKI2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42EP3Q9UKI2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42EP3Q9UKI2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.8■□□□□ 0.12
CDC42EP3Q9UKI2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42EP3Q9UKI2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42EP3Q9UKI2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.8■□□□□ 0.12
CDC42EP3Q9UKI2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.8■□□□□ 0.12
CDC42EP3Q9UKI2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.8■□□□□ 0.12
CDC42EP3Q9UKI2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.8■□□□□ 0.12
CDC42EP3Q9UKI2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms