Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTSFQ9UBX1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.84■□□□□ 0.45
CTSFQ9UBX1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTSFQ9UBX1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTSFQ9UBX1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTSFQ9UBX1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.84■□□□□ 0.45
CTSFQ9UBX1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.84■□□□□ 0.45
CTSFQ9UBX1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.84■□□□□ 0.45
CTSFQ9UBX1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTSFQ9UBX1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.84■□□□□ 0.45
CTSFQ9UBX1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTSFQ9UBX1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.84■□□□□ 0.45
CTSFQ9UBX1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTSFQ9UBX1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTSFQ9UBX1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTSFQ9UBX1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CTSFQ9UBX1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTSFQ9UBX1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTSFQ9UBX1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.84■□□□□ 0.45
CTSFQ9UBX1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CTSFQ9UBX1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTSFQ9UBX1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTSFQ9UBX1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.83■□□□□ 0.45
CTSFQ9UBX1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.83■□□□□ 0.45
CTSFQ9UBX1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTSFQ9UBX1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTSFQ9UBX1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CTSFQ9UBX1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.83■□□□□ 0.44
CTSFQ9UBX1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.83■□□□□ 0.44
CTSFQ9UBX1 AC022616.7-201ENST00000525383 220 ntBASIC17.83■□□□□ 0.44
CTSFQ9UBX1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTSFQ9UBX1 AL023973.1-201ENST00000624619 620 ntBASIC17.83■□□□□ 0.44
CTSFQ9UBX1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTSFQ9UBX1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.83■□□□□ 0.44
CTSFQ9UBX1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTSFQ9UBX1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
CTSFQ9UBX1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTSFQ9UBX1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.83■□□□□ 0.44
CTSFQ9UBX1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.82■□□□□ 0.44
CTSFQ9UBX1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.82■□□□□ 0.44
CTSFQ9UBX1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 RNF152P1-201ENST00000397754 604 ntBASIC17.82■□□□□ 0.44
CTSFQ9UBX1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 AC063952.2-201ENST00000498792 1227 ntBASIC17.82■□□□□ 0.44
CTSFQ9UBX1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
CTSFQ9UBX1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSFQ9UBX1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.81■□□□□ 0.44
CTSFQ9UBX1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CTSFQ9UBX1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSFQ9UBX1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSFQ9UBX1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTSFQ9UBX1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.81■□□□□ 0.44
CTSFQ9UBX1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.81■□□□□ 0.44
CTSFQ9UBX1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.81■□□□□ 0.44
CTSFQ9UBX1 GPAT2P1-201ENST00000444924 1672 ntBASIC17.81■□□□□ 0.44
CTSFQ9UBX1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.81■□□□□ 0.44
CTSFQ9UBX1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSFQ9UBX1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CTSFQ9UBX1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTSFQ9UBX1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSFQ9UBX1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSFQ9UBX1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSFQ9UBX1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.81■□□□□ 0.44
CTSFQ9UBX1 AC009947.2-201ENST00000444014 672 ntBASIC17.81■□□□□ 0.44
CTSFQ9UBX1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.81■□□□□ 0.44
CTSFQ9UBX1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.81■□□□□ 0.44
CTSFQ9UBX1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.81■□□□□ 0.44
CTSFQ9UBX1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.81■□□□□ 0.44
CTSFQ9UBX1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.81■□□□□ 0.44
CTSFQ9UBX1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSFQ9UBX1 AC011558.1-201ENST00000623459 338 ntBASIC17.81■□□□□ 0.44
CTSFQ9UBX1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.81■□□□□ 0.44
CTSFQ9UBX1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms