Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNTN3Q9P232 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.41■□□□□ 0.86
CNTN3Q9P232 RNF152P1-201ENST00000397754 604 ntBASIC20.41■□□□□ 0.86
CNTN3Q9P232 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.41■□□□□ 0.86
CNTN3Q9P232 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.41■□□□□ 0.86
CNTN3Q9P232 NEK4P2-201ENST00000580004 1012 ntBASIC20.41■□□□□ 0.86
CNTN3Q9P232 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNTN3Q9P232 AL031432.5-201ENST00000641059 760 ntBASIC20.41■□□□□ 0.86
CNTN3Q9P232 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNTN3Q9P232 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CNTN3Q9P232 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNTN3Q9P232 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CNTN3Q9P232 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNTN3Q9P232 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNTN3Q9P232 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CNTN3Q9P232 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNTN3Q9P232 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNTN3Q9P232 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNTN3Q9P232 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNTN3Q9P232 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNTN3Q9P232 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CNTN3Q9P232 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CNTN3Q9P232 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.4■□□□□ 0.86
CNTN3Q9P232 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNTN3Q9P232 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.4■□□□□ 0.86
CNTN3Q9P232 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNTN3Q9P232 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNTN3Q9P232 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.4■□□□□ 0.86
CNTN3Q9P232 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CNTN3Q9P232 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.4■□□□□ 0.86
CNTN3Q9P232 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.4■□□□□ 0.86
CNTN3Q9P232 AC009947.2-201ENST00000444014 672 ntBASIC20.4■□□□□ 0.86
CNTN3Q9P232 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.4■□□□□ 0.86
CNTN3Q9P232 AC022616.7-201ENST00000525383 220 ntBASIC20.4■□□□□ 0.86
CNTN3Q9P232 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.4■□□□□ 0.86
CNTN3Q9P232 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.4■□□□□ 0.86
CNTN3Q9P232 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.4■□□□□ 0.86
CNTN3Q9P232 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNTN3Q9P232 AC011558.1-201ENST00000623459 338 ntBASIC20.4■□□□□ 0.86
CNTN3Q9P232 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNTN3Q9P232 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CNTN3Q9P232 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNTN3Q9P232 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNTN3Q9P232 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CNTN3Q9P232 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CNTN3Q9P232 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNTN3Q9P232 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNTN3Q9P232 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CNTN3Q9P232 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTN3Q9P232 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTN3Q9P232 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.39■□□□□ 0.85
CNTN3Q9P232 TSPY5P-201ENST00000426936 936 ntBASIC20.39■□□□□ 0.85
CNTN3Q9P232 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.39■□□□□ 0.85
CNTN3Q9P232 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CNTN3Q9P232 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CNTN3Q9P232 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CNTN3Q9P232 AL023973.1-201ENST00000624619 620 ntBASIC20.39■□□□□ 0.85
CNTN3Q9P232 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.39■□□□□ 0.85
CNTN3Q9P232 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTN3Q9P232 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CNTN3Q9P232 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNTN3Q9P232 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.38■□□□□ 0.85
CNTN3Q9P232 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.38■□□□□ 0.85
CNTN3Q9P232 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.38■□□□□ 0.85
CNTN3Q9P232 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.38■□□□□ 0.85
CNTN3Q9P232 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNTN3Q9P232 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
CNTN3Q9P232 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNTN3Q9P232 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNTN3Q9P232 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNTN3Q9P232 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CNTN3Q9P232 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNTN3Q9P232 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNTN3Q9P232 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNTN3Q9P232 AP000523.1-201ENST00000398242 1049 ntBASIC20.38■□□□□ 0.85
CNTN3Q9P232 FAM8A6P-201ENST00000407496 1135 ntBASIC20.38■□□□□ 0.85
CNTN3Q9P232 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNTN3Q9P232 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.38■□□□□ 0.85
CNTN3Q9P232 MCCD1P1-208ENST00000445732 328 ntBASIC20.38■□□□□ 0.85
CNTN3Q9P232 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.38■□□□□ 0.85
CNTN3Q9P232 AL441883.1-201ENST00000566170 1045 ntBASIC20.38■□□□□ 0.85
CNTN3Q9P232 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.38■□□□□ 0.85
CNTN3Q9P232 NTF6B-201ENST00000591913 560 ntBASIC20.38■□□□□ 0.85
CNTN3Q9P232 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNTN3Q9P232 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNTN3Q9P232 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CNTN3Q9P232 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNTN3Q9P232 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNTN3Q9P232 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CNTN3Q9P232 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CNTN3Q9P232 AL512353.2-201ENST00000448759 1962 ntBASIC20.37■□□□□ 0.85
CNTN3Q9P232 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.37■□□□□ 0.85
CNTN3Q9P232 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNTN3Q9P232 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNTN3Q9P232 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.37■□□□□ 0.85
CNTN3Q9P232 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNTN3Q9P232 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNTN3Q9P232 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.37■□□□□ 0.85
CNTN3Q9P232 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNTN3Q9P232 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms