Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL20A1Q9P218 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
COL20A1Q9P218 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL20A1Q9P218 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL20A1Q9P218 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL20A1Q9P218 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.46■■□□□ 1.03
COL20A1Q9P218 STARP1-201ENST00000397973 869 ntBASIC21.46■■□□□ 1.03
COL20A1Q9P218 AC112907.2-201ENST00000448639 330 ntBASIC21.46■■□□□ 1.03
COL20A1Q9P218 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.46■■□□□ 1.03
COL20A1Q9P218 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.46■■□□□ 1.03
COL20A1Q9P218 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL20A1Q9P218 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.46■■□□□ 1.03
COL20A1Q9P218 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL20A1Q9P218 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.46■■□□□ 1.03
COL20A1Q9P218 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL20A1Q9P218 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.46■■□□□ 1.03
COL20A1Q9P218 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.46■■□□□ 1.03
COL20A1Q9P218 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.46■■□□□ 1.03
COL20A1Q9P218 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL20A1Q9P218 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.46■■□□□ 1.03
COL20A1Q9P218 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL20A1Q9P218 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL20A1Q9P218 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL20A1Q9P218 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.45■■□□□ 1.02
COL20A1Q9P218 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.45■■□□□ 1.02
COL20A1Q9P218 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL20A1Q9P218 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.45■■□□□ 1.02
COL20A1Q9P218 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
COL20A1Q9P218 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.45■■□□□ 1.02
COL20A1Q9P218 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL20A1Q9P218 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.45■■□□□ 1.02
COL20A1Q9P218 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.45■■□□□ 1.02
COL20A1Q9P218 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL20A1Q9P218 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.45■■□□□ 1.02
COL20A1Q9P218 AC024243.1-201ENST00000609234 778 ntBASIC21.45■■□□□ 1.02
COL20A1Q9P218 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL20A1Q9P218 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL20A1Q9P218 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
COL20A1Q9P218 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL20A1Q9P218 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL20A1Q9P218 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL20A1Q9P218 AC008556.1-201ENST00000610908 2040 ntBASIC21.45■■□□□ 1.02
COL20A1Q9P218 RCC2P3-201ENST00000418112 1537 ntBASIC21.45■■□□□ 1.02
COL20A1Q9P218 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.44■■□□□ 1.02
COL20A1Q9P218 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL20A1Q9P218 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
COL20A1Q9P218 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL20A1Q9P218 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL20A1Q9P218 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL20A1Q9P218 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.44■■□□□ 1.02
COL20A1Q9P218 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.44■■□□□ 1.02
COL20A1Q9P218 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL20A1Q9P218 SPDYE13P-201ENST00000445314 798 ntBASIC21.44■■□□□ 1.02
COL20A1Q9P218 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.44■■□□□ 1.02
COL20A1Q9P218 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.44■■□□□ 1.02
COL20A1Q9P218 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
COL20A1Q9P218 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
COL20A1Q9P218 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.44■■□□□ 1.02
COL20A1Q9P218 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.44■■□□□ 1.02
COL20A1Q9P218 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
COL20A1Q9P218 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL20A1Q9P218 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL20A1Q9P218 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
COL20A1Q9P218 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL20A1Q9P218 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.44■■□□□ 1.02
COL20A1Q9P218 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.44■■□□□ 1.02
COL20A1Q9P218 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.43■■□□□ 1.02
COL20A1Q9P218 FP475955.4-201ENST00000623131 1990 ntBASIC21.43■■□□□ 1.02
COL20A1Q9P218 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
COL20A1Q9P218 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL20A1Q9P218 PCED1CP-201ENST00000419887 785 ntBASIC21.43■■□□□ 1.02
COL20A1Q9P218 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.43■■□□□ 1.02
COL20A1Q9P218 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.43■■□□□ 1.02
COL20A1Q9P218 AC091076.1-201ENST00000610741 619 ntBASIC21.43■■□□□ 1.02
COL20A1Q9P218 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
COL20A1Q9P218 AC005332.1-201ENST00000577698 1310 ntBASIC21.43■■□□□ 1.02
COL20A1Q9P218 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.43■■□□□ 1.02
COL20A1Q9P218 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL20A1Q9P218 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.43■■□□□ 1.02
COL20A1Q9P218 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL20A1Q9P218 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.43■■□□□ 1.02
COL20A1Q9P218 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.43■■□□□ 1.02
COL20A1Q9P218 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
COL20A1Q9P218 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL20A1Q9P218 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL20A1Q9P218 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.42■■□□□ 1.02
COL20A1Q9P218 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.42■■□□□ 1.02
COL20A1Q9P218 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL20A1Q9P218 UPK3BP1-201ENST00000428678 509 ntBASIC21.42■■□□□ 1.02
COL20A1Q9P218 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
COL20A1Q9P218 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.42■■□□□ 1.02
COL20A1Q9P218 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
COL20A1Q9P218 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.42■■□□□ 1.02
COL20A1Q9P218 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.42■■□□□ 1.02
COL20A1Q9P218 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL20A1Q9P218 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.42■■□□□ 1.02
COL20A1Q9P218 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.42■■□□□ 1.02
COL20A1Q9P218 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.42■■□□□ 1.02
COL20A1Q9P218 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL20A1Q9P218 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms