Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
VAPAQ9P0L0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.95■□□□□ 0.46
VAPAQ9P0L0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VAPAQ9P0L0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
VAPAQ9P0L0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.95■□□□□ 0.46
VAPAQ9P0L0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VAPAQ9P0L0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
VAPAQ9P0L0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VAPAQ9P0L0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.95■□□□□ 0.46
VAPAQ9P0L0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.95■□□□□ 0.46
VAPAQ9P0L0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.95■□□□□ 0.46
VAPAQ9P0L0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VAPAQ9P0L0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VAPAQ9P0L0 NOC2LP2-201ENST00000407594 1944 ntBASIC17.94■□□□□ 0.46
VAPAQ9P0L0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.94■□□□□ 0.46
VAPAQ9P0L0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.94■□□□□ 0.46
VAPAQ9P0L0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VAPAQ9P0L0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VAPAQ9P0L0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
VAPAQ9P0L0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VAPAQ9P0L0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VAPAQ9P0L0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VAPAQ9P0L0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
VAPAQ9P0L0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.94■□□□□ 0.46
VAPAQ9P0L0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.94■□□□□ 0.46
VAPAQ9P0L0 AL138781.1-201ENST00000566567 1274 ntBASIC17.94■□□□□ 0.46
VAPAQ9P0L0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.94■□□□□ 0.46
VAPAQ9P0L0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.94■□□□□ 0.46
VAPAQ9P0L0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.94■□□□□ 0.46
VAPAQ9P0L0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.94■□□□□ 0.46
VAPAQ9P0L0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.94■□□□□ 0.46
VAPAQ9P0L0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
VAPAQ9P0L0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.94■□□□□ 0.46
VAPAQ9P0L0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VAPAQ9P0L0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VAPAQ9P0L0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
VAPAQ9P0L0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VAPAQ9P0L0 PCDHB18P-201ENST00000524813 2368 ntBASIC17.94■□□□□ 0.46
VAPAQ9P0L0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VAPAQ9P0L0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 AC068880.1-201ENST00000507289 2297 ntBASIC17.93■□□□□ 0.46
VAPAQ9P0L0 AC073592.3-201ENST00000625118 1834 ntBASIC17.93■□□□□ 0.46
VAPAQ9P0L0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 HLA-A-209ENST00000638375 975 ntBASIC17.93■□□□□ 0.46
VAPAQ9P0L0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VAPAQ9P0L0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 AL160286.2-201ENST00000567150 934 ntBASIC17.92■□□□□ 0.46
VAPAQ9P0L0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.92■□□□□ 0.46
VAPAQ9P0L0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms