Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
HCFC1R1Q9NWW0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HCFC1R1Q9NWW0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HCFC1R1Q9NWW0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.69■□□□□ 0.74
HCFC1R1Q9NWW0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.69■□□□□ 0.74
HCFC1R1Q9NWW0 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.69■□□□□ 0.74
HCFC1R1Q9NWW0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.69■□□□□ 0.74
HCFC1R1Q9NWW0 AC092329.2-201ENST00000598402 547 ntBASIC19.69■□□□□ 0.74
HCFC1R1Q9NWW0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.69■□□□□ 0.74
HCFC1R1Q9NWW0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HCFC1R1Q9NWW0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HCFC1R1Q9NWW0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HCFC1R1Q9NWW0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HCFC1R1Q9NWW0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 TSSC2-201ENST00000450217 709 ntBASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 AC112497.1-201ENST00000624824 639 ntBASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HCFC1R1Q9NWW0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 BX276092.5-203ENST00000456199 560 ntBASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 TREX1-205ENST00000625293 1783 ntBASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCFC1R1Q9NWW0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 AL162741.1-201ENST00000565563 1558 ntBASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 TEX21P-204ENST00000641479 1693 ntBASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 AC125437.2-201ENST00000625180 2167 ntBASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 AP002383.4-201ENST00000442518 975 ntBASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 MIR3652-201ENST00000579335 131 ntBASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 MIR3180-1-201ENST00000580374 94 ntBASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 MIR3180-3-201ENST00000584616 94 ntBASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 AL691432.3-201ENST00000621860 400 ntBASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.66■□□□□ 0.74
HCFC1R1Q9NWW0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms