Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS45Q9NRW7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.56■□□□□ 0.72
VPS45Q9NRW7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS45Q9NRW7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
VPS45Q9NRW7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS45Q9NRW7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS45Q9NRW7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
VPS45Q9NRW7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.56■□□□□ 0.72
VPS45Q9NRW7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
VPS45Q9NRW7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS45Q9NRW7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.56■□□□□ 0.72
VPS45Q9NRW7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.56■□□□□ 0.72
VPS45Q9NRW7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.56■□□□□ 0.72
VPS45Q9NRW7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.56■□□□□ 0.72
VPS45Q9NRW7 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.56■□□□□ 0.72
VPS45Q9NRW7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS45Q9NRW7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS45Q9NRW7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.56■□□□□ 0.72
VPS45Q9NRW7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS45Q9NRW7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.56■□□□□ 0.72
VPS45Q9NRW7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS45Q9NRW7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 SDHAP1-207ENST00000440850 2000 ntBASIC19.55■□□□□ 0.72
VPS45Q9NRW7 AC009947.2-201ENST00000444014 672 ntBASIC19.55■□□□□ 0.72
VPS45Q9NRW7 AC091390.4-202ENST00000476426 537 ntBASIC19.55■□□□□ 0.72
VPS45Q9NRW7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
VPS45Q9NRW7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS45Q9NRW7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS45Q9NRW7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS45Q9NRW7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS45Q9NRW7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
VPS45Q9NRW7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
VPS45Q9NRW7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS45Q9NRW7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS45Q9NRW7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VPS45Q9NRW7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS45Q9NRW7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.54■□□□□ 0.72
VPS45Q9NRW7 AC011506.1-201ENST00000474329 610 ntBASIC19.54■□□□□ 0.72
VPS45Q9NRW7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.54■□□□□ 0.72
VPS45Q9NRW7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.54■□□□□ 0.72
VPS45Q9NRW7 AC139887.4-201ENST00000607877 719 ntBASIC19.54■□□□□ 0.72
VPS45Q9NRW7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.54■□□□□ 0.72
VPS45Q9NRW7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
VPS45Q9NRW7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VPS45Q9NRW7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS45Q9NRW7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.53■□□□□ 0.72
VPS45Q9NRW7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS45Q9NRW7 AC141586.3-201ENST00000562166 1838 ntBASIC19.53■□□□□ 0.72
VPS45Q9NRW7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
VPS45Q9NRW7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS45Q9NRW7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.53■□□□□ 0.72
VPS45Q9NRW7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.53■□□□□ 0.72
VPS45Q9NRW7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
VPS45Q9NRW7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.53■□□□□ 0.72
VPS45Q9NRW7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VPS45Q9NRW7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS45Q9NRW7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
VPS45Q9NRW7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.53■□□□□ 0.72
VPS45Q9NRW7 AC092647.4-201ENST00000457211 535 ntBASIC19.53■□□□□ 0.72
VPS45Q9NRW7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.53■□□□□ 0.72
VPS45Q9NRW7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VPS45Q9NRW7 AL160286.2-201ENST00000567150 934 ntBASIC19.53■□□□□ 0.72
VPS45Q9NRW7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
VPS45Q9NRW7 AC131212.4-201ENST00000623606 975 ntBASIC19.53■□□□□ 0.72
VPS45Q9NRW7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS45Q9NRW7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS45Q9NRW7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS45Q9NRW7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS45Q9NRW7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS45Q9NRW7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms