Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 BMP1-211ENST00000520970 4333 ntTSL 1 (best)18.86■□□□□ 0.615e-7■■□□□ 14.5
DROSHAQ9NRR4 LINC01667-201ENST00000623554 1137 ntTSL 5 BASIC18.53■□□□□ 0.565e-7■■□□□ 14.5
DROSHAQ9NRR4 BMP1-212ENST00000520982 3244 ntTSL 1 (best)18.38■□□□□ 0.535e-7■■□□□ 14.5
DROSHAQ9NRR4 BMP1-210ENST00000520626 3925 ntTSL 1 (best)18.24■□□□□ 0.515e-7■■□□□ 14.5
DROSHAQ9NRR4 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.325e-7■■□□□ 14.5
DROSHAQ9NRR4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC27.8■■■□□ 2.043e-7■■□□□ 14.5
DROSHAQ9NRR4 ANKRD20A11P-206ENST00000451663 3717 ntBASIC11.69□□□□□ -0.543e-17■■□□□ 14.5
DROSHAQ9NRR4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.614e-8■■□□□ 14.5
DROSHAQ9NRR4 FLNA-216ENST00000490936 5374 ntTSL 1 (best)19.22■□□□□ 0.675e-8■■□□□ 14.5
DROSHAQ9NRR4 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.335e-8■■□□□ 14.5
DROSHAQ9NRR4 FLNA-206ENST00000420627 8225 ntTSL 515.01□□□□□ -0.015e-8■■□□□ 14.5
DROSHAQ9NRR4 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.035e-8■■□□□ 14.5
DROSHAQ9NRR4 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.055e-8■■□□□ 14.5
DROSHAQ9NRR4 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.085e-8■■□□□ 14.5
DROSHAQ9NRR4 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC13.29□□□□□ -0.285e-8■■□□□ 14.5
DROSHAQ9NRR4 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.315e-8■■□□□ 14.5
DROSHAQ9NRR4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.333e-7■■□□□ 14.5
DROSHAQ9NRR4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.413e-7■■□□□ 14.5
DROSHAQ9NRR4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.843e-6■■□□□ 14.5
DROSHAQ9NRR4 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.993e-6■■□□□ 14.5
DROSHAQ9NRR4 BRD4-205ENST00000594841 1821 ntAPPRIS ALT2 TSL 1 (best)20.84■□□□□ 0.931e-6■■□□□ 14.5
DROSHAQ9NRR4 BRD4-210ENST00000601941 604 ntTSL 518.61■□□□□ 0.571e-6■■□□□ 14.5
DROSHAQ9NRR4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.276e-30■■□□□ 14.5
DROSHAQ9NRR4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC22.1■■□□□ 1.136e-30■■□□□ 14.5
DROSHAQ9NRR4 PCBP2-201ENST00000359282 1730 ntTSL 1 (best) BASIC18.96■□□□□ 0.636e-30■■□□□ 14.5
DROSHAQ9NRR4 PCBP2-217ENST00000550520 753 ntTSL 316.64■□□□□ 0.256e-30■■□□□ 14.5
DROSHAQ9NRR4 PCBP2-203ENST00000437231 3026 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.26e-30■■□□□ 14.5
DROSHAQ9NRR4 AC023509.1-201ENST00000547717 1571 ntTSL 2 BASIC16.14■□□□□ 0.176e-30■■□□□ 14.5
DROSHAQ9NRR4 PCBP2-207ENST00000546463 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.036e-30■■□□□ 14.5
DROSHAQ9NRR4 PCBP2-205ENST00000447282 3077 ntTSL 5 BASIC14.38□□□□□ -0.116e-30■■□□□ 14.5
DROSHAQ9NRR4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC31.37■■■□□ 2.612e-10■■□□□ 14.5
DROSHAQ9NRR4 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.421e-6■■□□□ 14.5
DROSHAQ9NRR4 CBFA2T3-205ENST00000563856 2380 ntTSL 225.41■■□□□ 1.667e-7■■□□□ 14.5
DROSHAQ9NRR4 PANK4-210ENST00000505228 1913 ntTSL 527.72■■■□□ 2.031e-8■■□□□ 14.4
DROSHAQ9NRR4 PANK4-203ENST00000468002 670 ntTSL 525.56■■□□□ 1.681e-8■■□□□ 14.4
DROSHAQ9NRR4 PANK4-202ENST00000435556 2524 ntTSL 224.36■■□□□ 1.491e-8■■□□□ 14.4
DROSHAQ9NRR4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.451e-8■■□□□ 14.4
DROSHAQ9NRR4 PANK4-212ENST00000515423 430 ntTSL 319.92■□□□□ 0.781e-8■■□□□ 14.4
DROSHAQ9NRR4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.667e-7■■□□□ 14.4
DROSHAQ9NRR4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.387e-7■■□□□ 14.4
DROSHAQ9NRR4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC32.69■■■□□ 2.827e-8■■□□□ 14.4
DROSHAQ9NRR4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.267e-8■■□□□ 14.4
DROSHAQ9NRR4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC25.83■■□□□ 1.737e-8■■□□□ 14.4
DROSHAQ9NRR4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC23.86■■□□□ 1.417e-8■■□□□ 14.4
DROSHAQ9NRR4 NADK-205ENST00000460602 974 ntTSL 239.56■■■■□ 3.921e-6■■□□□ 14.4
DROSHAQ9NRR4 NADK-212ENST00000492768 859 ntTSL 339.56■■■■□ 3.921e-6■■□□□ 14.4
DROSHAQ9NRR4 NADK-213ENST00000492845 937 ntTSL 228.85■■■□□ 2.211e-6■■□□□ 14.4
DROSHAQ9NRR4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC25.16■■□□□ 1.621e-6■■□□□ 14.4
DROSHAQ9NRR4 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.681e-6■■□□□ 14.4
DROSHAQ9NRR4 NADK-204ENST00000378625 3653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.11e-6■■□□□ 14.4
DROSHAQ9NRR4 SREBF1-218ENST00000578469 588 ntTSL 325.4■■□□□ 1.661e-8■■□□□ 14.4
DROSHAQ9NRR4 AKT2-219ENST00000486368 606 ntTSL 415.06■□□□□ 02e-6■■□□□ 14.4
DROSHAQ9NRR4 FBXO31-203ENST00000563956 548 ntTSL 335.94■■■■□ 3.343e-10■■□□□ 14.4
DROSHAQ9NRR4 FBXO31-206ENST00000569412 431 ntTSL 58.24□□□□□ -1.093e-10■■□□□ 14.4
DROSHAQ9NRR4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC38.76■■■■□ 3.793e-6■■□□□ 14.4
DROSHAQ9NRR4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC35.22■■■■□ 3.234e-9■■□□□ 14.4
DROSHAQ9NRR4 KLF11-203ENST00000440320 653 ntTSL 234.6■■■■□ 3.132e-8■■□□□ 14.4
DROSHAQ9NRR4 HUWE1-205ENST00000446750 872 ntTSL 532.42■■■□□ 2.784e-9■■□□□ 14.4
DROSHAQ9NRR4 ARPC4-204ENST00000440787 910 ntTSL 330.19■■■□□ 2.424e-9■■□□□ 14.4
DROSHAQ9NRR4 ARPC4-202ENST00000417500 957 ntTSL 530.08■■■□□ 2.414e-9■■□□□ 14.4
DROSHAQ9NRR4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.814e-9■■□□□ 14.4
DROSHAQ9NRR4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC25.96■■□□□ 1.754e-9■■□□□ 14.4
DROSHAQ9NRR4 EMC4-204ENST00000557941 1201 ntTSL 225.57■■□□□ 1.684e-9■■□□□ 14.4
DROSHAQ9NRR4 EMC4-210ENST00000560911 579 ntTSL 225.03■■□□□ 1.64e-9■■□□□ 14.4
DROSHAQ9NRR4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC24.54■■□□□ 1.524e-9■■□□□ 14.4
DROSHAQ9NRR4 EMC4-205ENST00000558102 543 ntTSL 224.52■■□□□ 1.524e-9■■□□□ 14.4
DROSHAQ9NRR4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC23.64■■□□□ 1.374e-9■■□□□ 14.4
DROSHAQ9NRR4 EMC4-207ENST00000558810 652 ntTSL 223.48■■□□□ 1.354e-9■■□□□ 14.4
DROSHAQ9NRR4 EMC4-206ENST00000558205 1006 ntTSL 223.48■■□□□ 1.354e-9■■□□□ 14.4
DROSHAQ9NRR4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC23.48■■□□□ 1.354e-9■■□□□ 14.4
DROSHAQ9NRR4 KLF11-204ENST00000448523 559 ntTSL 422.96■■□□□ 1.272e-8■■□□□ 14.4
DROSHAQ9NRR4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.012e-8■■□□□ 14.4
DROSHAQ9NRR4 HUWE1-201ENST00000218328 5488 ntTSL 520.96■□□□□ 0.954e-9■■□□□ 14.4
DROSHAQ9NRR4 EMC4-208ENST00000559078 599 ntTSL 3 BASIC20.75■□□□□ 0.914e-9■■□□□ 14.4
DROSHAQ9NRR4 EMC4-213ENST00000561372 466 ntTSL 320.25■□□□□ 0.834e-9■■□□□ 14.4
DROSHAQ9NRR4 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.682e-8■■□□□ 14.4
DROSHAQ9NRR4 MIR4761-201ENST00000585066 82 ntBASIC18.3■□□□□ 0.524e-9■■□□□ 14.4
DROSHAQ9NRR4 ARPC4-TTLL3-203ENST00000424442 903 ntTSL 517.86■□□□□ 0.454e-9■■□□□ 14.4
DROSHAQ9NRR4 ARPC4-TTLL3-202ENST00000418163 551 ntTSL 417.3■□□□□ 0.364e-9■■□□□ 14.4
DROSHAQ9NRR4 KLF11-206ENST00000540845 3885 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.022e-8■■□□□ 14.4
DROSHAQ9NRR4 EMC4-202ENST00000267750 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.054e-9■■□□□ 14.4
DROSHAQ9NRR4 KLF11-202ENST00000401510 614 ntTSL 313.27□□□□□ -0.292e-8■■□□□ 14.4
DROSHAQ9NRR4 ARPC4-TTLL3-204ENST00000453882 499 ntTSL 411.53□□□□□ -0.564e-9■■□□□ 14.4
DROSHAQ9NRR4 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC11.02□□□□□ -0.654e-9■■□□□ 14.4
DROSHAQ9NRR4 ERBIN-216ENST00000512354 474 ntTSL 410.58□□□□□ -0.724e-9■■□□□ 14.4
DROSHAQ9NRR4 ERBIN-206ENST00000503913 544 ntTSL 38.25□□□□□ -1.094e-9■■□□□ 14.4
DROSHAQ9NRR4 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.71□□□□□ -1.54e-9■■□□□ 14.4
DROSHAQ9NRR4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.62□□□□□ -1.674e-9■■□□□ 14.4
DROSHAQ9NRR4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.714e-9■■□□□ 14.4
DROSHAQ9NRR4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.734e-9■■□□□ 14.4
DROSHAQ9NRR4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.16□□□□□ -1.744e-9■■□□□ 14.4
DROSHAQ9NRR4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.12□□□□□ -1.754e-9■■□□□ 14.4
DROSHAQ9NRR4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.53□□□□□ -1.844e-9■■□□□ 14.4
DROSHAQ9NRR4 ERBIN-215ENST00000511671 589 ntTSL 31.97□□□□□ -2.094e-9■■□□□ 14.4
DROSHAQ9NRR4 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.694e-10■■□□□ 14.4
DROSHAQ9NRR4 FAM98B-204ENST00000559431 305 ntTSL 516.03■□□□□ 0.164e-10■■□□□ 14.4
DROSHAQ9NRR4 GNB1-202ENST00000434686 684 ntTSL 317.43■□□□□ 0.387e-14■■□□□ 14.4
DROSHAQ9NRR4 EIF4A1-216ENST00000580888 710 ntTSL 226.82■■□□□ 1.886e-7■■□□□ 14.4
DROSHAQ9NRR4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC26.22■■□□□ 1.796e-7■■□□□ 14.4
DROSHAQ9NRR4 EIF4A1-208ENST00000578476 573 ntTSL 225.4■■□□□ 1.666e-7■■□□□ 14.4
Retrieved 100 of 16,331 protein–RNA pairs in 175.1 ms