Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 PNMA6B-201ENST00000538162 1200 ntBASIC13.08□□□□□ -0.32
CDC42SE2Q9NRR3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC13.08□□□□□ -0.32
CDC42SE2Q9NRR3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC13.08□□□□□ -0.32
CDC42SE2Q9NRR3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CDC42SE2Q9NRR3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.08□□□□□ -0.32
CDC42SE2Q9NRR3 MIR4758-201ENST00000577688 71 ntBASIC13.08□□□□□ -0.32
CDC42SE2Q9NRR3 AC060766.5-201ENST00000590539 871 ntBASIC13.08□□□□□ -0.32
CDC42SE2Q9NRR3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC42SE2Q9NRR3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC42SE2Q9NRR3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CDC42SE2Q9NRR3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC42SE2Q9NRR3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CDC42SE2Q9NRR3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC13.08□□□□□ -0.32
CDC42SE2Q9NRR3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.08□□□□□ -0.32
CDC42SE2Q9NRR3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CDC42SE2Q9NRR3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CDC42SE2Q9NRR3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CDC42SE2Q9NRR3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 SLC29A4P2-201ENST00000504749 1089 ntBASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 IKBKGP1-201ENST00000612193 1073 ntBASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 NOC2LP1-202ENST00000452600 2235 ntBASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE2Q9NRR3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 AC006970.2-201ENST00000450065 779 ntBASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 AL137784.2-201ENST00000607332 1000 ntBASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 MYC-209ENST00000641252 345 ntBASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
CDC42SE2Q9NRR3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDC42SE2Q9NRR3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDC42SE2Q9NRR3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CDC42SE2Q9NRR3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDC42SE2Q9NRR3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDC42SE2Q9NRR3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms