Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDLIM7Q9NR12 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
PDLIM7Q9NR12 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDLIM7Q9NR12 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDLIM7Q9NR12 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.25■□□□□ 0.99
PDLIM7Q9NR12 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDLIM7Q9NR12 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.25■□□□□ 0.99
PDLIM7Q9NR12 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDLIM7Q9NR12 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PDLIM7Q9NR12 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDLIM7Q9NR12 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDLIM7Q9NR12 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDLIM7Q9NR12 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDLIM7Q9NR12 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
PDLIM7Q9NR12 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDLIM7Q9NR12 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDLIM7Q9NR12 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDLIM7Q9NR12 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
PDLIM7Q9NR12 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.24■□□□□ 0.99
PDLIM7Q9NR12 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDLIM7Q9NR12 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
PDLIM7Q9NR12 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDLIM7Q9NR12 AL645929.1-201ENST00000420084 975 ntBASIC21.24■□□□□ 0.99
PDLIM7Q9NR12 FAAHP1-202ENST00000446499 1238 ntBASIC21.24■□□□□ 0.99
PDLIM7Q9NR12 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.24■□□□□ 0.99
PDLIM7Q9NR12 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
PDLIM7Q9NR12 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDLIM7Q9NR12 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PDLIM7Q9NR12 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDLIM7Q9NR12 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.24■□□□□ 0.99
PDLIM7Q9NR12 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDLIM7Q9NR12 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDLIM7Q9NR12 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.24■□□□□ 0.99
PDLIM7Q9NR12 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM7Q9NR12 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM7Q9NR12 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM7Q9NR12 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM7Q9NR12 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM7Q9NR12 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.23■□□□□ 0.99
PDLIM7Q9NR12 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM7Q9NR12 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.23■□□□□ 0.99
PDLIM7Q9NR12 HBZP1-201ENST00000354915 429 ntBASIC21.23■□□□□ 0.99
PDLIM7Q9NR12 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.23■□□□□ 0.99
PDLIM7Q9NR12 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.23■□□□□ 0.99
PDLIM7Q9NR12 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PDLIM7Q9NR12 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.23■□□□□ 0.99
PDLIM7Q9NR12 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.23■□□□□ 0.99
PDLIM7Q9NR12 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.23■□□□□ 0.99
PDLIM7Q9NR12 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.23■□□□□ 0.99
PDLIM7Q9NR12 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM7Q9NR12 GPALPP1-207ENST00000611650 899 ntBASIC21.23■□□□□ 0.99
PDLIM7Q9NR12 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PDLIM7Q9NR12 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.23■□□□□ 0.99
PDLIM7Q9NR12 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM7Q9NR12 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM7Q9NR12 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.23■□□□□ 0.99
PDLIM7Q9NR12 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.23■□□□□ 0.99
PDLIM7Q9NR12 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 AC023511.2-201ENST00000618803 211 ntBASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM7Q9NR12 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.21■□□□□ 0.99
PDLIM7Q9NR12 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDLIM7Q9NR12 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDLIM7Q9NR12 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDLIM7Q9NR12 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDLIM7Q9NR12 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDLIM7Q9NR12 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
PDLIM7Q9NR12 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.21■□□□□ 0.99
PDLIM7Q9NR12 MIR3180-1-201ENST00000580374 94 ntBASIC21.21■□□□□ 0.99
PDLIM7Q9NR12 MIR3180-3-201ENST00000584616 94 ntBASIC21.21■□□□□ 0.99
PDLIM7Q9NR12 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.21■□□□□ 0.99
PDLIM7Q9NR12 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.21■□□□□ 0.99
PDLIM7Q9NR12 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDLIM7Q9NR12 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDLIM7Q9NR12 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDLIM7Q9NR12 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms