Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN4Q9NQP4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN4Q9NQP4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN4Q9NQP4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN4Q9NQP4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN4Q9NQP4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN4Q9NQP4 AC104417.2-201ENST00000562989 1793 ntBASIC18.66■□□□□ 0.58
PFDN4Q9NQP4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN4Q9NQP4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN4Q9NQP4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.66■□□□□ 0.58
PFDN4Q9NQP4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PFDN4Q9NQP4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.66■□□□□ 0.58
PFDN4Q9NQP4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.66■□□□□ 0.58
PFDN4Q9NQP4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN4Q9NQP4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN4Q9NQP4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN4Q9NQP4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN4Q9NQP4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.66■□□□□ 0.58
PFDN4Q9NQP4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.66■□□□□ 0.58
PFDN4Q9NQP4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
PFDN4Q9NQP4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN4Q9NQP4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN4Q9NQP4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 MYC-209ENST00000641252 345 ntBASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 Z98044.1-201ENST00000632503 1764 ntBASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.65■□□□□ 0.58
PFDN4Q9NQP4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PFDN4Q9NQP4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
PFDN4Q9NQP4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.64■□□□□ 0.58
PFDN4Q9NQP4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 ID1-201ENST00000376105 1233 ntBASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 AC060766.5-201ENST00000590539 871 ntBASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 AC083880.1-201ENST00000608266 535 ntBASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 HLA-B-256ENST00000639848 1089 ntBASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PFDN4Q9NQP4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN4Q9NQP4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.63■□□□□ 0.57
PFDN4Q9NQP4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PFDN4Q9NQP4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PFDN4Q9NQP4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN4Q9NQP4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN4Q9NQP4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN4Q9NQP4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN4Q9NQP4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.63■□□□□ 0.57
PFDN4Q9NQP4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.63■□□□□ 0.57
PFDN4Q9NQP4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.63■□□□□ 0.57
PFDN4Q9NQP4 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.63■□□□□ 0.57
PFDN4Q9NQP4 PNMA6B-201ENST00000538162 1200 ntBASIC18.63■□□□□ 0.57
PFDN4Q9NQP4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN4Q9NQP4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms