Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 AC073592.3-201ENST00000625118 1834 ntBASIC17.22■□□□□ 0.35
HMG20AQ9NP66 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 FAM21FP-204ENST00000608637 956 ntBASIC17.22■□□□□ 0.35
HMG20AQ9NP66 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 TERF1P5-201ENST00000477545 1207 ntBASIC17.21■□□□□ 0.35
HMG20AQ9NP66 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 AC010536.3-201ENST00000620306 533 ntBASIC17.21■□□□□ 0.35
HMG20AQ9NP66 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.21■□□□□ 0.35
HMG20AQ9NP66 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
HMG20AQ9NP66 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
HMG20AQ9NP66 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HMG20AQ9NP66 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HMG20AQ9NP66 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HMG20AQ9NP66 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 KRT18P11-201ENST00000435214 1283 ntBASIC17.2■□□□□ 0.34
HMG20AQ9NP66 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 AC126763.1-201ENST00000552015 2118 ntBASIC17.2■□□□□ 0.34
HMG20AQ9NP66 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20AQ9NP66 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMG20AQ9NP66 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
HMG20AQ9NP66 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.19■□□□□ 0.34
HMG20AQ9NP66 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms