Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 RPS2P52-201ENST00000469610 820 ntBASIC18.11■□□□□ 0.49
PIF1Q9H611 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PIF1Q9H611 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.11■□□□□ 0.49
PIF1Q9H611 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.11■□□□□ 0.49
PIF1Q9H611 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.11■□□□□ 0.49
PIF1Q9H611 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PIF1Q9H611 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PIF1Q9H611 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PIF1Q9H611 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PIF1Q9H611 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PIF1Q9H611 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PIF1Q9H611 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PIF1Q9H611 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PIF1Q9H611 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.11■□□□□ 0.49
PIF1Q9H611 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PIF1Q9H611 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.11■□□□□ 0.49
PIF1Q9H611 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PIF1Q9H611 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PIF1Q9H611 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PIF1Q9H611 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PIF1Q9H611 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PIF1Q9H611 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PIF1Q9H611 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PIF1Q9H611 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.1■□□□□ 0.49
PIF1Q9H611 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.1■□□□□ 0.49
PIF1Q9H611 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.1■□□□□ 0.49
PIF1Q9H611 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.1■□□□□ 0.49
PIF1Q9H611 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PIF1Q9H611 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.1■□□□□ 0.49
PIF1Q9H611 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PIF1Q9H611 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PIF1Q9H611 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PIF1Q9H611 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PIF1Q9H611 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PIF1Q9H611 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PIF1Q9H611 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PIF1Q9H611 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.1■□□□□ 0.49
PIF1Q9H611 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.1■□□□□ 0.49
PIF1Q9H611 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PIF1Q9H611 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.1■□□□□ 0.49
PIF1Q9H611 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.1■□□□□ 0.49
PIF1Q9H611 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.1■□□□□ 0.49
PIF1Q9H611 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
PIF1Q9H611 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.1■□□□□ 0.49
PIF1Q9H611 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PIF1Q9H611 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.1■□□□□ 0.49
PIF1Q9H611 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PIF1Q9H611 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PIF1Q9H611 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PIF1Q9H611 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.09■□□□□ 0.49
PIF1Q9H611 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PIF1Q9H611 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.09■□□□□ 0.49
PIF1Q9H611 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PIF1Q9H611 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PIF1Q9H611 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PIF1Q9H611 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PIF1Q9H611 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PIF1Q9H611 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PIF1Q9H611 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PIF1Q9H611 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PIF1Q9H611 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PIF1Q9H611 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.09■□□□□ 0.49
PIF1Q9H611 AC073210.2-201ENST00000430369 194 ntBASIC18.09■□□□□ 0.49
PIF1Q9H611 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.09■□□□□ 0.49
PIF1Q9H611 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PIF1Q9H611 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.09■□□□□ 0.49
PIF1Q9H611 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.09■□□□□ 0.49
PIF1Q9H611 AC092118.2-201ENST00000613495 667 ntBASIC18.09■□□□□ 0.49
PIF1Q9H611 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PIF1Q9H611 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PIF1Q9H611 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PIF1Q9H611 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PIF1Q9H611 BICD1-207ENST00000551848 1962 ntBASIC18.09■□□□□ 0.49
PIF1Q9H611 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.09■□□□□ 0.49
PIF1Q9H611 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PIF1Q9H611 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.09■□□□□ 0.49
PIF1Q9H611 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PIF1Q9H611 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PIF1Q9H611 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.08■□□□□ 0.49
PIF1Q9H611 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PIF1Q9H611 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PIF1Q9H611 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
PIF1Q9H611 KRT8P8-201ENST00000434750 1448 ntBASIC18.08■□□□□ 0.49
PIF1Q9H611 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PIF1Q9H611 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PIF1Q9H611 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PIF1Q9H611 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PIF1Q9H611 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PIF1Q9H611 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PIF1Q9H611 GUSBP6-202ENST00000438529 1198 ntBASIC18.08■□□□□ 0.48
PIF1Q9H611 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.08■□□□□ 0.48
PIF1Q9H611 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.08■□□□□ 0.48
PIF1Q9H611 MIR4758-201ENST00000577688 71 ntBASIC18.08■□□□□ 0.48
PIF1Q9H611 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.08■□□□□ 0.48
PIF1Q9H611 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PIF1Q9H611 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PIF1Q9H611 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PIF1Q9H611 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.08■□□□□ 0.48
PIF1Q9H611 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PIF1Q9H611 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms