Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 TSPY18P-201ENST00000441642 509 ntBASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 AL732292.2-201ENST00000609649 430 ntBASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDH11XQ9BZA7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC24.6■■□□□ 1.53
PCDH11XQ9BZA7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
PCDH11XQ9BZA7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDH11XQ9BZA7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
PCDH11XQ9BZA7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
PCDH11XQ9BZA7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDH11XQ9BZA7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
PCDH11XQ9BZA7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDH11XQ9BZA7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC24.6■■□□□ 1.53
PCDH11XQ9BZA7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
PCDH11XQ9BZA7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDH11XQ9BZA7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC24.6■■□□□ 1.53
PCDH11XQ9BZA7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDH11XQ9BZA7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC24.6■■□□□ 1.53
PCDH11XQ9BZA7 LINC00265-3P-201ENST00000447588 903 ntBASIC24.6■■□□□ 1.53
PCDH11XQ9BZA7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC24.6■■□□□ 1.53
PCDH11XQ9BZA7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDH11XQ9BZA7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDH11XQ9BZA7 AC010240.3-201ENST00000607688 395 ntBASIC24.6■■□□□ 1.53
PCDH11XQ9BZA7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDH11XQ9BZA7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH11XQ9BZA7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH11XQ9BZA7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC24.59■■□□□ 1.53
PCDH11XQ9BZA7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC24.59■■□□□ 1.53
PCDH11XQ9BZA7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH11XQ9BZA7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH11XQ9BZA7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH11XQ9BZA7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC24.59■■□□□ 1.53
PCDH11XQ9BZA7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC24.59■■□□□ 1.53
PCDH11XQ9BZA7 AC104390.1-201ENST00000555663 520 ntBASIC24.59■■□□□ 1.53
PCDH11XQ9BZA7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
PCDH11XQ9BZA7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
PCDH11XQ9BZA7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDH11XQ9BZA7 Z82202.1-201ENST00000623446 1880 ntBASIC24.58■■□□□ 1.53
PCDH11XQ9BZA7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDH11XQ9BZA7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PCDH11XQ9BZA7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PCDH11XQ9BZA7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
PCDH11XQ9BZA7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
PCDH11XQ9BZA7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
PCDH11XQ9BZA7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC24.58■■□□□ 1.52
PCDH11XQ9BZA7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC24.58■■□□□ 1.52
PCDH11XQ9BZA7 TOB2P1-201ENST00000469761 992 ntBASIC24.58■■□□□ 1.52
PCDH11XQ9BZA7 AP000867.3-201ENST00000524675 377 ntBASIC24.58■■□□□ 1.52
PCDH11XQ9BZA7 AC012615.1-201ENST00000565797 1299 ntBASIC24.58■■□□□ 1.52
PCDH11XQ9BZA7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC24.58■■□□□ 1.52
PCDH11XQ9BZA7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
PCDH11XQ9BZA7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
PCDH11XQ9BZA7 AL512353.2-201ENST00000448759 1962 ntBASIC24.58■■□□□ 1.52
PCDH11XQ9BZA7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PCDH11XQ9BZA7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
PCDH11XQ9BZA7 AC008556.1-201ENST00000610908 2040 ntBASIC24.57■■□□□ 1.52
PCDH11XQ9BZA7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDH11XQ9BZA7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDH11XQ9BZA7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDH11XQ9BZA7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC24.57■■□□□ 1.52
PCDH11XQ9BZA7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
PCDH11XQ9BZA7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
PCDH11XQ9BZA7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDH11XQ9BZA7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC24.57■■□□□ 1.52
PCDH11XQ9BZA7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PCDH11XQ9BZA7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC24.57■■□□□ 1.52
PCDH11XQ9BZA7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDH11XQ9BZA7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDH11XQ9BZA7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDH11XQ9BZA7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDH11XQ9BZA7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDH11XQ9BZA7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC24.57■■□□□ 1.52
PCDH11XQ9BZA7 PNN-202ENST00000553331 656 ntTSL 3 BASIC24.57■■□□□ 1.52
PCDH11XQ9BZA7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC24.57■■□□□ 1.52
PCDH11XQ9BZA7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
PCDH11XQ9BZA7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDH11XQ9BZA7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDH11XQ9BZA7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDH11XQ9BZA7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
PCDH11XQ9BZA7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC24.56■■□□□ 1.52
PCDH11XQ9BZA7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC24.56■■□□□ 1.52
PCDH11XQ9BZA7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDH11XQ9BZA7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDH11XQ9BZA7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDH11XQ9BZA7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDH11XQ9BZA7 EMBP1-201ENST00000458200 901 ntBASIC24.56■■□□□ 1.52
PCDH11XQ9BZA7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDH11XQ9BZA7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC24.56■■□□□ 1.52
PCDH11XQ9BZA7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC24.56■■□□□ 1.52
PCDH11XQ9BZA7 AL031008.1-201ENST00000619963 541 ntBASIC24.56■■□□□ 1.52
PCDH11XQ9BZA7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC24.56■■□□□ 1.52
PCDH11XQ9BZA7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC24.56■■□□□ 1.52
PCDH11XQ9BZA7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDH11XQ9BZA7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC24.56■■□□□ 1.52
PCDH11XQ9BZA7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDH11XQ9BZA7 KATNBL1P6-202ENST00000562413 1466 ntBASIC24.55■■□□□ 1.52
PCDH11XQ9BZA7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms