Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTFDC1Q9BY42 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RTFDC1Q9BY42 CIB2-208ENST00000560618 804 ntTSL 2 BASIC23.05■■□□□ 1.28
RTFDC1Q9BY42 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC23.05■■□□□ 1.28
RTFDC1Q9BY42 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC23.05■■□□□ 1.28
RTFDC1Q9BY42 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTFDC1Q9BY42 AL732292.2-201ENST00000609649 430 ntBASIC23.05■■□□□ 1.28
RTFDC1Q9BY42 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTFDC1Q9BY42 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTFDC1Q9BY42 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RTFDC1Q9BY42 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.05■■□□□ 1.28
RTFDC1Q9BY42 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTFDC1Q9BY42 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
RTFDC1Q9BY42 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.04■■□□□ 1.28
RTFDC1Q9BY42 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTFDC1Q9BY42 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTFDC1Q9BY42 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC23.04■■□□□ 1.28
RTFDC1Q9BY42 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTFDC1Q9BY42 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
RTFDC1Q9BY42 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC23.04■■□□□ 1.28
RTFDC1Q9BY42 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RTFDC1Q9BY42 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
RTFDC1Q9BY42 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RTFDC1Q9BY42 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTFDC1Q9BY42 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RTFDC1Q9BY42 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC23.04■■□□□ 1.28
RTFDC1Q9BY42 AL031008.1-201ENST00000619963 541 ntBASIC23.04■■□□□ 1.28
RTFDC1Q9BY42 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
RTFDC1Q9BY42 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTFDC1Q9BY42 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
RTFDC1Q9BY42 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
RTFDC1Q9BY42 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTFDC1Q9BY42 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RTFDC1Q9BY42 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
RTFDC1Q9BY42 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTFDC1Q9BY42 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.03■■□□□ 1.28
RTFDC1Q9BY42 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTFDC1Q9BY42 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTFDC1Q9BY42 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
RTFDC1Q9BY42 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTFDC1Q9BY42 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTFDC1Q9BY42 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTFDC1Q9BY42 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC23.03■■□□□ 1.28
RTFDC1Q9BY42 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC23.03■■□□□ 1.28
RTFDC1Q9BY42 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC23.03■■□□□ 1.28
RTFDC1Q9BY42 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
RTFDC1Q9BY42 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTFDC1Q9BY42 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTFDC1Q9BY42 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
RTFDC1Q9BY42 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTFDC1Q9BY42 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTFDC1Q9BY42 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.03■■□□□ 1.28
RTFDC1Q9BY42 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTFDC1Q9BY42 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTFDC1Q9BY42 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTFDC1Q9BY42 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
RTFDC1Q9BY42 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTFDC1Q9BY42 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC23.02■■□□□ 1.28
RTFDC1Q9BY42 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
RTFDC1Q9BY42 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.02■■□□□ 1.28
RTFDC1Q9BY42 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTFDC1Q9BY42 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTFDC1Q9BY42 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.02■■□□□ 1.28
RTFDC1Q9BY42 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTFDC1Q9BY42 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.02■■□□□ 1.28
RTFDC1Q9BY42 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTFDC1Q9BY42 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
RTFDC1Q9BY42 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTFDC1Q9BY42 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC23.02■■□□□ 1.28
RTFDC1Q9BY42 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC23.02■■□□□ 1.28
RTFDC1Q9BY42 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC23.02■■□□□ 1.28
RTFDC1Q9BY42 AL160237.2-201ENST00000556165 472 ntBASIC23.02■■□□□ 1.28
RTFDC1Q9BY42 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC23.02■■□□□ 1.28
RTFDC1Q9BY42 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RTFDC1Q9BY42 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC23.02■■□□□ 1.28
RTFDC1Q9BY42 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RTFDC1Q9BY42 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTFDC1Q9BY42 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
RTFDC1Q9BY42 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23.02■■□□□ 1.28
RTFDC1Q9BY42 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTFDC1Q9BY42 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC23.02■■□□□ 1.28
RTFDC1Q9BY42 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.01■■□□□ 1.27
RTFDC1Q9BY42 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
RTFDC1Q9BY42 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTFDC1Q9BY42 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RTFDC1Q9BY42 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.01■■□□□ 1.27
RTFDC1Q9BY42 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.01■■□□□ 1.27
RTFDC1Q9BY42 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTFDC1Q9BY42 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC23.01■■□□□ 1.27
RTFDC1Q9BY42 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTFDC1Q9BY42 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC23.01■■□□□ 1.27
RTFDC1Q9BY42 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC23.01■■□□□ 1.27
RTFDC1Q9BY42 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTFDC1Q9BY42 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC23.01■■□□□ 1.27
RTFDC1Q9BY42 AC012615.1-201ENST00000565797 1299 ntBASIC23.01■■□□□ 1.27
RTFDC1Q9BY42 AL121772.3-201ENST00000610840 674 ntBASIC23.01■■□□□ 1.27
RTFDC1Q9BY42 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC23.01■■□□□ 1.27
RTFDC1Q9BY42 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RTFDC1Q9BY42 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTFDC1Q9BY42 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms