Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 AP002982.1-201ENST00000492365 877 ntBASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 AC141586.5-201ENST00000624546 2050 ntBASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.95■□□□□ 0.3
TRAF4Q9BUZ4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRAF4Q9BUZ4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAF4Q9BUZ4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAF4Q9BUZ4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRAF4Q9BUZ4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAF4Q9BUZ4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAF4Q9BUZ4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.94■□□□□ 0.3
TRAF4Q9BUZ4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF4Q9BUZ4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF4Q9BUZ4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAF4Q9BUZ4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF4Q9BUZ4 AL353708.3-201ENST00000610272 989 ntBASIC16.94■□□□□ 0.3
TRAF4Q9BUZ4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRAF4Q9BUZ4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF4Q9BUZ4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRAF4Q9BUZ4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF4Q9BUZ4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF4Q9BUZ4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TRAF4Q9BUZ4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRAF4Q9BUZ4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
TRAF4Q9BUZ4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRAF4Q9BUZ4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAF4Q9BUZ4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 AC097493.4-201ENST00000641197 219 ntBASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAF4Q9BUZ4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 AC012306.2-201ENST00000609350 630 ntBASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 AC018470.1-201ENST00000624790 3129 ntBASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms