Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.75■■□□□ 1.07
PTPN18Q99952 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN18Q99952 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN18Q99952 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.75■■□□□ 1.07
PTPN18Q99952 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN18Q99952 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN18Q99952 KRT18P13-201ENST00000400056 1290 ntBASIC21.75■■□□□ 1.07
PTPN18Q99952 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.75■■□□□ 1.07
PTPN18Q99952 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.75■■□□□ 1.07
PTPN18Q99952 SLC25A1P1-201ENST00000528351 927 ntBASIC21.75■■□□□ 1.07
PTPN18Q99952 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PTPN18Q99952 TP73-AS1-207ENST00000624167 988 ntBASIC21.75■■□□□ 1.07
PTPN18Q99952 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PTPN18Q99952 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN18Q99952 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.75■■□□□ 1.07
PTPN18Q99952 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.75■■□□□ 1.07
PTPN18Q99952 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.75■■□□□ 1.07
PTPN18Q99952 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PTPN18Q99952 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN18Q99952 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.74■■□□□ 1.07
PTPN18Q99952 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN18Q99952 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
PTPN18Q99952 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
PTPN18Q99952 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.74■■□□□ 1.07
PTPN18Q99952 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.74■■□□□ 1.07
PTPN18Q99952 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN18Q99952 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.74■■□□□ 1.07
PTPN18Q99952 AP003733.1-201ENST00000491725 852 ntBASIC21.74■■□□□ 1.07
PTPN18Q99952 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.74■■□□□ 1.07
PTPN18Q99952 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PTPN18Q99952 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.74■■□□□ 1.07
PTPN18Q99952 REXO1L6P-202ENST00000619970 1078 ntBASIC21.74■■□□□ 1.07
PTPN18Q99952 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN18Q99952 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.74■■□□□ 1.07
PTPN18Q99952 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.74■■□□□ 1.07
PTPN18Q99952 LINC00565-201ENST00000562710 2331 ntBASIC21.74■■□□□ 1.07
PTPN18Q99952 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN18Q99952 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PTPN18Q99952 AL162377.1-201ENST00000618844 1793 ntBASIC21.74■■□□□ 1.07
PTPN18Q99952 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN18Q99952 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN18Q99952 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.73■■□□□ 1.07
PTPN18Q99952 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN18Q99952 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN18Q99952 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN18Q99952 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN18Q99952 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.73■■□□□ 1.07
PTPN18Q99952 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN18Q99952 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN18Q99952 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN18Q99952 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.73■■□□□ 1.07
PTPN18Q99952 SAPCD2P3-201ENST00000455031 850 ntBASIC21.73■■□□□ 1.07
PTPN18Q99952 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.73■■□□□ 1.07
PTPN18Q99952 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.73■■□□□ 1.07
PTPN18Q99952 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.73■■□□□ 1.07
PTPN18Q99952 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN18Q99952 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN18Q99952 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN18Q99952 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN18Q99952 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN18Q99952 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN18Q99952 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.72■■□□□ 1.07
PTPN18Q99952 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN18Q99952 AC104390.1-201ENST00000555663 520 ntBASIC21.72■■□□□ 1.07
PTPN18Q99952 Z69720.1-201ENST00000601483 472 ntBASIC21.72■■□□□ 1.07
PTPN18Q99952 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN18Q99952 AC010240.3-201ENST00000607688 395 ntBASIC21.72■■□□□ 1.07
PTPN18Q99952 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.72■■□□□ 1.07
PTPN18Q99952 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PTPN18Q99952 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PTPN18Q99952 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN18Q99952 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN18Q99952 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN18Q99952 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.71■■□□□ 1.07
PTPN18Q99952 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PTPN18Q99952 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN18Q99952 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN18Q99952 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN18Q99952 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
PTPN18Q99952 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.71■■□□□ 1.07
PTPN18Q99952 AP005901.3-202ENST00000581653 237 ntBASIC21.71■■□□□ 1.07
PTPN18Q99952 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.71■■□□□ 1.07
PTPN18Q99952 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN18Q99952 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PTPN18Q99952 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.71■■□□□ 1.07
PTPN18Q99952 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN18Q99952 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN18Q99952 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
PTPN18Q99952 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN18Q99952 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN18Q99952 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN18Q99952 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN18Q99952 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.7■■□□□ 1.06
PTPN18Q99952 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN18Q99952 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN18Q99952 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN18Q99952 KRT18P23-201ENST00000435622 1283 ntBASIC21.7■■□□□ 1.06
PTPN18Q99952 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN18Q99952 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.7■■□□□ 1.06
PTPN18Q99952 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms