Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
NEK1Q96PY6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
NEK1Q96PY6 AC093525.10-201ENST00000625130 1569 ntBASIC22.46■■□□□ 1.19
NEK1Q96PY6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
NEK1Q96PY6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
NEK1Q96PY6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC22.45■■□□□ 1.19
NEK1Q96PY6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
NEK1Q96PY6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC22.45■■□□□ 1.19
NEK1Q96PY6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
NEK1Q96PY6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NEK1Q96PY6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC22.45■■□□□ 1.18
NEK1Q96PY6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC22.45■■□□□ 1.18
NEK1Q96PY6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.45■■□□□ 1.18
NEK1Q96PY6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
NEK1Q96PY6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC22.45■■□□□ 1.18
NEK1Q96PY6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.45■■□□□ 1.18
NEK1Q96PY6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NEK1Q96PY6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.45■■□□□ 1.18
NEK1Q96PY6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NEK1Q96PY6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC22.45■■□□□ 1.18
NEK1Q96PY6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NEK1Q96PY6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
NEK1Q96PY6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC22.45■■□□□ 1.18
NEK1Q96PY6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
NEK1Q96PY6 AL031598.1-201ENST00000561511 1773 ntBASIC22.45■■□□□ 1.18
NEK1Q96PY6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
NEK1Q96PY6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NEK1Q96PY6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22.45■■□□□ 1.18
NEK1Q96PY6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
NEK1Q96PY6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NEK1Q96PY6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NEK1Q96PY6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NEK1Q96PY6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
NEK1Q96PY6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
NEK1Q96PY6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.44■■□□□ 1.18
NEK1Q96PY6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
NEK1Q96PY6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC22.44■■□□□ 1.18
NEK1Q96PY6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC22.44■■□□□ 1.18
NEK1Q96PY6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.44■■□□□ 1.18
NEK1Q96PY6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
NEK1Q96PY6 AL512353.2-201ENST00000448759 1962 ntBASIC22.44■■□□□ 1.18
NEK1Q96PY6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC22.44■■□□□ 1.18
NEK1Q96PY6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NEK1Q96PY6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.44■■□□□ 1.18
NEK1Q96PY6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC22.44■■□□□ 1.18
NEK1Q96PY6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.44■■□□□ 1.18
NEK1Q96PY6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.44■■□□□ 1.18
NEK1Q96PY6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NEK1Q96PY6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC22.44■■□□□ 1.18
NEK1Q96PY6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NEK1Q96PY6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC22.44■■□□□ 1.18
NEK1Q96PY6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
NEK1Q96PY6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NEK1Q96PY6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
NEK1Q96PY6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
NEK1Q96PY6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC22.43■■□□□ 1.18
NEK1Q96PY6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
NEK1Q96PY6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
NEK1Q96PY6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC22.43■■□□□ 1.18
NEK1Q96PY6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NEK1Q96PY6 AL138781.2-201ENST00000617896 1843 ntBASIC22.43■■□□□ 1.18
NEK1Q96PY6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
NEK1Q96PY6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC22.43■■□□□ 1.18
NEK1Q96PY6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NEK1Q96PY6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.43■■□□□ 1.18
NEK1Q96PY6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC22.43■■□□□ 1.18
NEK1Q96PY6 REXO1L10P-201ENST00000615707 1290 ntBASIC22.43■■□□□ 1.18
NEK1Q96PY6 REXO1L12P-201ENST00000622156 912 ntBASIC22.43■■□□□ 1.18
NEK1Q96PY6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
NEK1Q96PY6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
NEK1Q96PY6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NEK1Q96PY6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
NEK1Q96PY6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
NEK1Q96PY6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
NEK1Q96PY6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.42■■□□□ 1.18
NEK1Q96PY6 KATNBL1P6-202ENST00000562413 1466 ntBASIC22.42■■□□□ 1.18
NEK1Q96PY6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
NEK1Q96PY6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NEK1Q96PY6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
NEK1Q96PY6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NEK1Q96PY6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
NEK1Q96PY6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NEK1Q96PY6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
NEK1Q96PY6 AL355355.2-201ENST00000442321 338 ntBASIC22.42■■□□□ 1.18
NEK1Q96PY6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
NEK1Q96PY6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC22.42■■□□□ 1.18
NEK1Q96PY6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC22.42■■□□□ 1.18
NEK1Q96PY6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC22.42■■□□□ 1.18
NEK1Q96PY6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.42■■□□□ 1.18
NEK1Q96PY6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
NEK1Q96PY6 AC026471.5-201ENST00000615068 467 ntBASIC22.42■■□□□ 1.18
NEK1Q96PY6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NEK1Q96PY6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC22.42■■□□□ 1.18
NEK1Q96PY6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC22.42■■□□□ 1.18
NEK1Q96PY6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NEK1Q96PY6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
NEK1Q96PY6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC22.42■■□□□ 1.18
NEK1Q96PY6 KRT8P3-201ENST00000519669 1449 ntBASIC22.41■■□□□ 1.18
NEK1Q96PY6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
NEK1Q96PY6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms