Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CMTM3Q96MX0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CMTM3Q96MX0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CMTM3Q96MX0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.32■□□□□ 0.2
CMTM3Q96MX0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CMTM3Q96MX0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CMTM3Q96MX0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CMTM3Q96MX0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.32■□□□□ 0.2
CMTM3Q96MX0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CMTM3Q96MX0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.32■□□□□ 0.2
CMTM3Q96MX0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CMTM3Q96MX0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CMTM3Q96MX0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CMTM3Q96MX0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CMTM3Q96MX0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 TSPY21P-201ENST00000433481 731 ntBASIC16.31■□□□□ 0.2
CMTM3Q96MX0 YBX1P10-201ENST00000444752 975 ntBASIC16.31■□□□□ 0.2
CMTM3Q96MX0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 AC069236.1-201ENST00000604339 616 ntBASIC16.31■□□□□ 0.2
CMTM3Q96MX0 MYC-208ENST00000641036 567 ntBASIC16.31■□□□□ 0.2
CMTM3Q96MX0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CMTM3Q96MX0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMTM3Q96MX0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms