Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RPS2P55-201ENST00000397318 883 ntBASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 FAM197Y1-201ENST00000421178 764 ntBASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 AC107956.1-201ENST00000494359 873 ntBASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 AC068587.9-201ENST00000641814 219 ntBASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 ANO7L1-203ENST00000602586 1720 ntBASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 AC012618.2-201ENST00000428058 849 ntBASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 AP001412.1-201ENST00000608405 714 ntBASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM5Q96HC4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 ABHD17AP1-201ENST00000358206 933 ntBASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 AC233702.5-201ENST00000584107 538 ntBASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM5Q96HC4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDLIM5Q96HC4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDLIM5Q96HC4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDLIM5Q96HC4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDLIM5Q96HC4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
PDLIM5Q96HC4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.52■□□□□ 0.55
PDLIM5Q96HC4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDLIM5Q96HC4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.52■□□□□ 0.55
PDLIM5Q96HC4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDLIM5Q96HC4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 AL158047.1-201ENST00000445918 881 ntBASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms