Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.89■□□□□ 0.45
SLC47A1Q96FL8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC47A1Q96FL8 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.89■□□□□ 0.45
SLC47A1Q96FL8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC47A1Q96FL8 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.89■□□□□ 0.45
SLC47A1Q96FL8 HLA-B-256ENST00000639848 1089 ntBASIC17.89■□□□□ 0.45
SLC47A1Q96FL8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC47A1Q96FL8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC47A1Q96FL8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC47A1Q96FL8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC47A1Q96FL8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC47A1Q96FL8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC47A1Q96FL8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC47A1Q96FL8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC47A1Q96FL8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC47A1Q96FL8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 AC092368.3-202ENST00000574180 1591 ntBASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 AC006557.6-201ENST00000623071 864 ntBASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 MYC-209ENST00000641252 345 ntBASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 AC068880.1-201ENST00000507289 2297 ntBASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC47A1Q96FL8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 FEM1AP3-201ENST00000403722 1741 ntBASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 LTB4R2-202ENST00000528054 3092 ntBASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 AL109923.1-201ENST00000618799 583 ntBASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC47A1Q96FL8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC47A1Q96FL8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC47A1Q96FL8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SLC47A1Q96FL8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SLC47A1Q96FL8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC47A1Q96FL8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
SLC47A1Q96FL8 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SLC47A1Q96FL8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC47A1Q96FL8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SLC47A1Q96FL8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC47A1Q96FL8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC47A1Q96FL8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC47A1Q96FL8 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.86■□□□□ 0.45
SLC47A1Q96FL8 AL138781.1-201ENST00000566567 1274 ntBASIC17.86■□□□□ 0.45
SLC47A1Q96FL8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.86■□□□□ 0.45
SLC47A1Q96FL8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC47A1Q96FL8 AC060766.5-201ENST00000590539 871 ntBASIC17.86■□□□□ 0.45
SLC47A1Q96FL8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.86■□□□□ 0.45
SLC47A1Q96FL8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC47A1Q96FL8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC47A1Q96FL8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SLC47A1Q96FL8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC47A1Q96FL8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SLC47A1Q96FL8 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms