Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.77■□□□□ 0.6
SH3KBP1Q96B97 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SH3KBP1Q96B97 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3KBP1Q96B97 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SH3KBP1Q96B97 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SH3KBP1Q96B97 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SH3KBP1Q96B97 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3KBP1Q96B97 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SH3KBP1Q96B97 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.77■□□□□ 0.6
SH3KBP1Q96B97 Z85996.1-201ENST00000494644 937 ntBASIC18.77■□□□□ 0.6
SH3KBP1Q96B97 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.77■□□□□ 0.6
SH3KBP1Q96B97 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.77■□□□□ 0.6
SH3KBP1Q96B97 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3KBP1Q96B97 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3KBP1Q96B97 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
SH3KBP1Q96B97 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
SH3KBP1Q96B97 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SH3KBP1Q96B97 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 TSPY14P-201ENST00000303979 915 ntBASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 AC091390.4-202ENST00000476426 537 ntBASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 AC096733.2-201ENST00000609937 1394 ntBASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3KBP1Q96B97 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.75■□□□□ 0.59
SH3KBP1Q96B97 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3KBP1Q96B97 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.75■□□□□ 0.59
SH3KBP1Q96B97 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.75■□□□□ 0.59
SH3KBP1Q96B97 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3KBP1Q96B97 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3KBP1Q96B97 AC005332.7-201ENST00000614046 2005 ntBASIC18.75■□□□□ 0.59
SH3KBP1Q96B97 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.75■□□□□ 0.59
SH3KBP1Q96B97 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.75■□□□□ 0.59
SH3KBP1Q96B97 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.75■□□□□ 0.59
SH3KBP1Q96B97 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3KBP1Q96B97 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3KBP1Q96B97 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SH3KBP1Q96B97 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.75■□□□□ 0.59
SH3KBP1Q96B97 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3KBP1Q96B97 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SH3KBP1Q96B97 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SH3KBP1Q96B97 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
SH3KBP1Q96B97 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3KBP1Q96B97 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 ZNF815P-204ENST00000434898 1737 ntBASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 RCN1P1-201ENST00000400413 996 ntBASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 MIR1224-201ENST00000408193 85 ntBASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 MFAP1P1-201ENST00000442257 1255 ntBASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 AC092865.7-201ENST00000641832 219 ntBASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms