Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A3Q93084 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.95■□□□□ 0.78
ATP2A3Q93084 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A3Q93084 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
ATP2A3Q93084 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A3Q93084 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A3Q93084 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
ATP2A3Q93084 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
ATP2A3Q93084 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.95■□□□□ 0.78
ATP2A3Q93084 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A3Q93084 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.95■□□□□ 0.78
ATP2A3Q93084 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.95■□□□□ 0.78
ATP2A3Q93084 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ATP2A3Q93084 NTF6B-201ENST00000591913 560 ntBASIC19.95■□□□□ 0.78
ATP2A3Q93084 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
ATP2A3Q93084 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A3Q93084 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A3Q93084 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.95■□□□□ 0.78
ATP2A3Q93084 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A3Q93084 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.95■□□□□ 0.78
ATP2A3Q93084 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ATP2A3Q93084 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A3Q93084 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A3Q93084 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.94■□□□□ 0.78
ATP2A3Q93084 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
ATP2A3Q93084 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
ATP2A3Q93084 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
ATP2A3Q93084 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A3Q93084 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A3Q93084 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A3Q93084 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
ATP2A3Q93084 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.94■□□□□ 0.78
ATP2A3Q93084 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A3Q93084 AC010653.2-201ENST00000623505 997 ntBASIC19.94■□□□□ 0.78
ATP2A3Q93084 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A3Q93084 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A3Q93084 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A3Q93084 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.94■□□□□ 0.78
ATP2A3Q93084 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A3Q93084 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP2A3Q93084 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATP2A3Q93084 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATP2A3Q93084 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ATP2A3Q93084 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ATP2A3Q93084 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP2A3Q93084 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP2A3Q93084 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP2A3Q93084 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.93■□□□□ 0.78
ATP2A3Q93084 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.93■□□□□ 0.78
ATP2A3Q93084 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ATP2A3Q93084 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP2A3Q93084 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.93■□□□□ 0.78
ATP2A3Q93084 AC087388.1-201ENST00000571370 1112 ntBASIC19.93■□□□□ 0.78
ATP2A3Q93084 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP2A3Q93084 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.93■□□□□ 0.78
ATP2A3Q93084 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATP2A3Q93084 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP2A3Q93084 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATP2A3Q93084 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.93■□□□□ 0.78
ATP2A3Q93084 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ATP2A3Q93084 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP2A3Q93084 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP2A3Q93084 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A3Q93084 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A3Q93084 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A3Q93084 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A3Q93084 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A3Q93084 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A3Q93084 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
ATP2A3Q93084 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.92■□□□□ 0.78
ATP2A3Q93084 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A3Q93084 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A3Q93084 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
ATP2A3Q93084 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.92■□□□□ 0.78
ATP2A3Q93084 LINC01238-205ENST00000567549 1107 ntBASIC19.92■□□□□ 0.78
ATP2A3Q93084 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.92■□□□□ 0.78
ATP2A3Q93084 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
ATP2A3Q93084 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.92■□□□□ 0.78
ATP2A3Q93084 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.92■□□□□ 0.78
ATP2A3Q93084 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
ATP2A3Q93084 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A3Q93084 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
ATP2A3Q93084 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
ATP2A3Q93084 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A3Q93084 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A3Q93084 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP2A3Q93084 AC005332.7-201ENST00000614046 2005 ntBASIC19.92■□□□□ 0.78
ATP2A3Q93084 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A3Q93084 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A3Q93084 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A3Q93084 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A3Q93084 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.91■□□□□ 0.78
ATP2A3Q93084 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ATP2A3Q93084 AK4P3-201ENST00000418260 669 ntBASIC19.91■□□□□ 0.78
ATP2A3Q93084 TSPY17P-201ENST00000450329 467 ntBASIC19.91■□□□□ 0.78
ATP2A3Q93084 WWOX-216ENST00000569818 525 ntBASIC19.91■□□□□ 0.78
ATP2A3Q93084 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A3Q93084 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.91■□□□□ 0.78
ATP2A3Q93084 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
ATP2A3Q93084 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms