Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 SUDS3P1-201ENST00000505831 966 ntBASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 AC013268.1-206ENST00000638368 961 ntBASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 AC112229.1-201ENST00000639295 961 ntBASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM4Q8WVI0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM4Q8WVI0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM4Q8WVI0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM4Q8WVI0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM4Q8WVI0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SMIM4Q8WVI0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM4Q8WVI0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM4Q8WVI0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM4Q8WVI0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.21■□□□□ 0.19
SMIM4Q8WVI0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM4Q8WVI0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM4Q8WVI0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.21■□□□□ 0.19
SMIM4Q8WVI0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM4Q8WVI0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.21■□□□□ 0.19
SMIM4Q8WVI0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.21■□□□□ 0.19
SMIM4Q8WVI0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SMIM4Q8WVI0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
SMIM4Q8WVI0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM4Q8WVI0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SMIM4Q8WVI0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.21■□□□□ 0.19
SMIM4Q8WVI0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SMIM4Q8WVI0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.21■□□□□ 0.19
SMIM4Q8WVI0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.21■□□□□ 0.18
SMIM4Q8WVI0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SMIM4Q8WVI0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SMIM4Q8WVI0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SMIM4Q8WVI0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SMIM4Q8WVI0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 CYP2T3P-201ENST00000601990 817 ntBASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.2■□□□□ 0.18
SMIM4Q8WVI0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms