Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SNED1Q8TER0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.09■■□□□ 1.29
SNED1Q8TER0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SNED1Q8TER0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SNED1Q8TER0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC23.09■■□□□ 1.29
SNED1Q8TER0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SNED1Q8TER0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SNED1Q8TER0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC23.08■■□□□ 1.29
SNED1Q8TER0 AP000867.3-201ENST00000524675 377 ntBASIC23.08■■□□□ 1.29
SNED1Q8TER0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC23.08■■□□□ 1.29
SNED1Q8TER0 AL390719.2-201ENST00000606993 987 ntBASIC23.08■■□□□ 1.29
SNED1Q8TER0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC23.08■■□□□ 1.29
SNED1Q8TER0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SNED1Q8TER0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.08■■□□□ 1.29
SNED1Q8TER0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SNED1Q8TER0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC23.08■■□□□ 1.29
SNED1Q8TER0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
SNED1Q8TER0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SNED1Q8TER0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.08■■□□□ 1.29
SNED1Q8TER0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC23.08■■□□□ 1.29
SNED1Q8TER0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
SNED1Q8TER0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SNED1Q8TER0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
SNED1Q8TER0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SNED1Q8TER0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SNED1Q8TER0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SNED1Q8TER0 KRT16P4-201ENST00000453883 522 ntBASIC23.08■■□□□ 1.28
SNED1Q8TER0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC23.08■■□□□ 1.28
SNED1Q8TER0 AL121772.3-201ENST00000610840 674 ntBASIC23.08■■□□□ 1.28
SNED1Q8TER0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC23.08■■□□□ 1.28
SNED1Q8TER0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC23.07■■□□□ 1.28
SNED1Q8TER0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC23.07■■□□□ 1.28
SNED1Q8TER0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SNED1Q8TER0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SNED1Q8TER0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
SNED1Q8TER0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SNED1Q8TER0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SNED1Q8TER0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC23.07■■□□□ 1.28
SNED1Q8TER0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
SNED1Q8TER0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC23.07■■□□□ 1.28
SNED1Q8TER0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
SNED1Q8TER0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SNED1Q8TER0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC23.07■■□□□ 1.28
SNED1Q8TER0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC23.07■■□□□ 1.28
SNED1Q8TER0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
SNED1Q8TER0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC23.07■■□□□ 1.28
SNED1Q8TER0 GRAMD4P1-201ENST00000435181 1110 ntBASIC23.07■■□□□ 1.28
SNED1Q8TER0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC23.07■■□□□ 1.28
SNED1Q8TER0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC23.07■■□□□ 1.28
SNED1Q8TER0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SNED1Q8TER0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
SNED1Q8TER0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SNED1Q8TER0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SNED1Q8TER0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SNED1Q8TER0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SNED1Q8TER0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.06■■□□□ 1.28
SNED1Q8TER0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC23.06■■□□□ 1.28
SNED1Q8TER0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SNED1Q8TER0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SNED1Q8TER0 RNA5SP419-201ENST00000515908 135 ntBASIC23.06■■□□□ 1.28
SNED1Q8TER0 AC091304.2-201ENST00000564639 760 ntBASIC23.06■■□□□ 1.28
SNED1Q8TER0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SNED1Q8TER0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
SNED1Q8TER0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.06■■□□□ 1.28
SNED1Q8TER0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC23.06■■□□□ 1.28
SNED1Q8TER0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNED1Q8TER0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
SNED1Q8TER0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNED1Q8TER0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNED1Q8TER0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNED1Q8TER0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SNED1Q8TER0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC23.05■■□□□ 1.28
SNED1Q8TER0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC23.05■■□□□ 1.28
SNED1Q8TER0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SNED1Q8TER0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
SNED1Q8TER0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNED1Q8TER0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SNED1Q8TER0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.05■■□□□ 1.28
SNED1Q8TER0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
SNED1Q8TER0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
SNED1Q8TER0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
SNED1Q8TER0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNED1Q8TER0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SNED1Q8TER0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.04■■□□□ 1.28
SNED1Q8TER0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
SNED1Q8TER0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.04■■□□□ 1.28
SNED1Q8TER0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SNED1Q8TER0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SNED1Q8TER0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SNED1Q8TER0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SNED1Q8TER0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SNED1Q8TER0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
SNED1Q8TER0 Z83836.1-201ENST00000624605 1642 ntBASIC23.04■■□□□ 1.28
SNED1Q8TER0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SNED1Q8TER0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.04■■□□□ 1.28
SNED1Q8TER0 HLA-A-201ENST00000376802 1334 ntBASIC23.04■■□□□ 1.28
SNED1Q8TER0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SNED1Q8TER0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SNED1Q8TER0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SNED1Q8TER0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms