Protein–RNA interactions for Protein: Q8NHY6

ZFP28, Zinc finger protein 28 homolog, humanhuman

Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFP28Q8NHY6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 KRT18P16-201ENST00000510337 1294 ntBASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZFP28Q8NHY6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 RNA5SP413-201ENST00000516373 109 ntBASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZFP28Q8NHY6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZFP28Q8NHY6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.27■□□□□ 0.52
ZFP28Q8NHY6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ZFP28Q8NHY6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.27■□□□□ 0.52
ZFP28Q8NHY6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
ZFP28Q8NHY6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZFP28Q8NHY6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.27■□□□□ 0.52
ZFP28Q8NHY6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZFP28Q8NHY6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZFP28Q8NHY6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.27■□□□□ 0.52
ZFP28Q8NHY6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZFP28Q8NHY6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZFP28Q8NHY6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.27■□□□□ 0.52
ZFP28Q8NHY6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.27■□□□□ 0.52
ZFP28Q8NHY6 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.27■□□□□ 0.52
ZFP28Q8NHY6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
ZFP28Q8NHY6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
ZFP28Q8NHY6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.27■□□□□ 0.51
ZFP28Q8NHY6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.27■□□□□ 0.51
ZFP28Q8NHY6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 AP003097.1-201ENST00000530657 1135 ntBASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZFP28Q8NHY6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms