Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 CNN2P6-201ENST00000439038 900 ntBASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 AC012313.1-201ENST00000593393 3059 ntBASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 AC083906.6-201ENST00000641366 219 ntBASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 AC139713.2-201ENST00000641328 2723 ntBASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.74■□□□□ 0.59
RFWD2Q8NHY2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 AC007322.1-201ENST00000426983 750 ntBASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RFWD2Q8NHY2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFWD2Q8NHY2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
RFWD2Q8NHY2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFWD2Q8NHY2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFWD2Q8NHY2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RFWD2Q8NHY2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFWD2Q8NHY2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RFWD2Q8NHY2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFWD2Q8NHY2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFWD2Q8NHY2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFWD2Q8NHY2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.72■□□□□ 0.59
RFWD2Q8NHY2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.72■□□□□ 0.59
RFWD2Q8NHY2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.72■□□□□ 0.59
RFWD2Q8NHY2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.72■□□□□ 0.59
RFWD2Q8NHY2 AC080038.1-201ENST00000611274 1154 ntBASIC18.72■□□□□ 0.59
RFWD2Q8NHY2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.72■□□□□ 0.59
RFWD2Q8NHY2 AL589743.5-201ENST00000616611 1050 ntBASIC18.72■□□□□ 0.59
RFWD2Q8NHY2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RFWD2Q8NHY2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms