Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NUP43Q8NFH3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.75■□□□□ 0.43
NUP43Q8NFH3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.75■□□□□ 0.43
NUP43Q8NFH3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUP43Q8NFH3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUP43Q8NFH3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUP43Q8NFH3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUP43Q8NFH3 AL135905.2-201ENST00000584934 1404 ntBASIC17.75■□□□□ 0.43
NUP43Q8NFH3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUP43Q8NFH3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUP43Q8NFH3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUP43Q8NFH3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NUP43Q8NFH3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NUP43Q8NFH3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.75■□□□□ 0.43
NUP43Q8NFH3 GCSHP5-201ENST00000443090 522 ntBASIC17.75■□□□□ 0.43
NUP43Q8NFH3 UBE2SP1-201ENST00000450587 669 ntBASIC17.75■□□□□ 0.43
NUP43Q8NFH3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NUP43Q8NFH3 AC026271.3-201ENST00000571884 352 ntBASIC17.75■□□□□ 0.43
NUP43Q8NFH3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUP43Q8NFH3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUP43Q8NFH3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.75■□□□□ 0.43
NUP43Q8NFH3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUP43Q8NFH3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.75■□□□□ 0.43
NUP43Q8NFH3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.74■□□□□ 0.43
NUP43Q8NFH3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 PRSS44-201ENST00000515154 1146 ntBASIC17.74■□□□□ 0.43
NUP43Q8NFH3 AC011298.2-201ENST00000617989 482 ntBASIC17.74■□□□□ 0.43
NUP43Q8NFH3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.74■□□□□ 0.43
NUP43Q8NFH3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 ABHD17AP1-201ENST00000358206 933 ntBASIC17.73■□□□□ 0.43
NUP43Q8NFH3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 FAM197Y1-201ENST00000421178 764 ntBASIC17.73■□□□□ 0.43
NUP43Q8NFH3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
NUP43Q8NFH3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 AL138781.2-201ENST00000617896 1843 ntBASIC17.72■□□□□ 0.43
NUP43Q8NFH3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 AC093525.10-201ENST00000625130 1569 ntBASIC17.72■□□□□ 0.43
NUP43Q8NFH3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms