Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 MESTP1-201ENST00000404287 994 ntBASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRFBP1Q8NEF9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 AC087289.5-201ENST00000586076 3175 ntBASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 AC008040.2-201ENST00000461049 708 ntBASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 AP003071.4-201ENST00000562276 1284 ntBASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 REXO1L10P-201ENST00000615707 1290 ntBASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 REXO1L12P-201ENST00000622156 912 ntBASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SRFBP1Q8NEF9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SRFBP1Q8NEF9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SRFBP1Q8NEF9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.08■□□□□ 0.49
SRFBP1Q8NEF9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.49
SRFBP1Q8NEF9 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SRFBP1Q8NEF9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SRFBP1Q8NEF9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SRFBP1Q8NEF9 AC096733.2-201ENST00000609937 1394 ntBASIC18.08■□□□□ 0.49
SRFBP1Q8NEF9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.08■□□□□ 0.49
SRFBP1Q8NEF9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SRFBP1Q8NEF9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SRFBP1Q8NEF9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SRFBP1Q8NEF9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.08■□□□□ 0.48
SRFBP1Q8NEF9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.08■□□□□ 0.48
SRFBP1Q8NEF9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.08■□□□□ 0.48
SRFBP1Q8NEF9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.08■□□□□ 0.48
SRFBP1Q8NEF9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.08■□□□□ 0.48
SRFBP1Q8NEF9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.08■□□□□ 0.48
SRFBP1Q8NEF9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.08■□□□□ 0.48
SRFBP1Q8NEF9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.08■□□□□ 0.48
SRFBP1Q8NEF9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SRFBP1Q8NEF9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SRFBP1Q8NEF9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SRFBP1Q8NEF9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
SRFBP1Q8NEF9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SRFBP1Q8NEF9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.08■□□□□ 0.48
SRFBP1Q8NEF9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SRFBP1Q8NEF9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SRFBP1Q8NEF9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SRFBP1Q8NEF9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms