Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COLGALT1Q8NBJ5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COLGALT1Q8NBJ5 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COLGALT1Q8NBJ5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COLGALT1Q8NBJ5 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 AC104417.2-201ENST00000562989 1793 ntBASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
COLGALT1Q8NBJ5 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 SPDYE13P-201ENST00000445314 798 ntBASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.42■□□□□ 0.86
COLGALT1Q8NBJ5 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COLGALT1Q8NBJ5 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
COLGALT1Q8NBJ5 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COLGALT1Q8NBJ5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
COLGALT1Q8NBJ5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COLGALT1Q8NBJ5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.41■□□□□ 0.86
COLGALT1Q8NBJ5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.41■□□□□ 0.86
COLGALT1Q8NBJ5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COLGALT1Q8NBJ5 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COLGALT1Q8NBJ5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.41■□□□□ 0.86
COLGALT1Q8NBJ5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.41■□□□□ 0.86
COLGALT1Q8NBJ5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.41■□□□□ 0.86
COLGALT1Q8NBJ5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COLGALT1Q8NBJ5 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
COLGALT1Q8NBJ5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COLGALT1Q8NBJ5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
COLGALT1Q8NBJ5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.41■□□□□ 0.86
COLGALT1Q8NBJ5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
COLGALT1Q8NBJ5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.41■□□□□ 0.86
COLGALT1Q8NBJ5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COLGALT1Q8NBJ5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COLGALT1Q8NBJ5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COLGALT1Q8NBJ5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COLGALT1Q8NBJ5 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COLGALT1Q8NBJ5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COLGALT1Q8NBJ5 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COLGALT1Q8NBJ5 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
COLGALT1Q8NBJ5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
COLGALT1Q8NBJ5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COLGALT1Q8NBJ5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COLGALT1Q8NBJ5 ATP5G2P1-201ENST00000433580 426 ntBASIC20.4■□□□□ 0.86
COLGALT1Q8NBJ5 TSPY23P-201ENST00000440136 739 ntBASIC20.4■□□□□ 0.86
COLGALT1Q8NBJ5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.4■□□□□ 0.86
COLGALT1Q8NBJ5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COLGALT1Q8NBJ5 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COLGALT1Q8NBJ5 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COLGALT1Q8NBJ5 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
COLGALT1Q8NBJ5 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.4■□□□□ 0.86
COLGALT1Q8NBJ5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.4■□□□□ 0.86
COLGALT1Q8NBJ5 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COLGALT1Q8NBJ5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.4■□□□□ 0.86
COLGALT1Q8NBJ5 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COLGALT1Q8NBJ5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms