Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATPAF2Q8N5M1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.46■□□□□ 0.71
ATPAF2Q8N5M1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 SLC25A1P4-201ENST00000567977 778 ntBASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 AC066615.1-201ENST00000640911 628 ntBASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
ATPAF2Q8N5M1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 AC097488.1-201ENST00000507834 756 ntBASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 MIR4497-201ENST00000583208 89 ntBASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 KRT17P2-201ENST00000300992 1314 ntBASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 AC096733.2-201ENST00000609937 1394 ntBASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATPAF2Q8N5M1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATPAF2Q8N5M1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ATPAF2Q8N5M1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.43■□□□□ 0.7
ATPAF2Q8N5M1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ATPAF2Q8N5M1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATPAF2Q8N5M1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATPAF2Q8N5M1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATPAF2Q8N5M1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATPAF2Q8N5M1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.43■□□□□ 0.7
ATPAF2Q8N5M1 MFAP1P1-201ENST00000442257 1255 ntBASIC19.43■□□□□ 0.7
ATPAF2Q8N5M1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
ATPAF2Q8N5M1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.43■□□□□ 0.7
ATPAF2Q8N5M1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.43■□□□□ 0.7
ATPAF2Q8N5M1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.43■□□□□ 0.7
ATPAF2Q8N5M1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.43■□□□□ 0.7
ATPAF2Q8N5M1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.43■□□□□ 0.7
ATPAF2Q8N5M1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATPAF2Q8N5M1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATPAF2Q8N5M1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATPAF2Q8N5M1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATPAF2Q8N5M1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
ATPAF2Q8N5M1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATPAF2Q8N5M1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.43■□□□□ 0.7
ATPAF2Q8N5M1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATPAF2Q8N5M1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATPAF2Q8N5M1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATPAF2Q8N5M1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.42■□□□□ 0.7
ATPAF2Q8N5M1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ATPAF2Q8N5M1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ATPAF2Q8N5M1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.42■□□□□ 0.7
ATPAF2Q8N5M1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
ATPAF2Q8N5M1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATPAF2Q8N5M1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATPAF2Q8N5M1 UNC93B2-201ENST00000285383 730 ntBASIC19.42■□□□□ 0.7
ATPAF2Q8N5M1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATPAF2Q8N5M1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.42■□□□□ 0.7
ATPAF2Q8N5M1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATPAF2Q8N5M1 RBM17P1-201ENST00000453646 1190 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms