Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39CQ8N584 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.16■□□□□ 0.82
TTC39CQ8N584 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39CQ8N584 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39CQ8N584 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.16■□□□□ 0.82
TTC39CQ8N584 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39CQ8N584 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TTC39CQ8N584 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39CQ8N584 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.16■□□□□ 0.82
TTC39CQ8N584 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.16■□□□□ 0.82
TTC39CQ8N584 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.16■□□□□ 0.82
TTC39CQ8N584 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39CQ8N584 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.16■□□□□ 0.82
TTC39CQ8N584 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.16■□□□□ 0.82
TTC39CQ8N584 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39CQ8N584 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39CQ8N584 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39CQ8N584 AC083906.6-201ENST00000641366 219 ntBASIC20.16■□□□□ 0.82
TTC39CQ8N584 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.16■□□□□ 0.82
TTC39CQ8N584 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TTC39CQ8N584 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39CQ8N584 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39CQ8N584 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39CQ8N584 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TTC39CQ8N584 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
TTC39CQ8N584 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TTC39CQ8N584 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TTC39CQ8N584 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TTC39CQ8N584 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TTC39CQ8N584 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.15■□□□□ 0.82
TTC39CQ8N584 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TTC39CQ8N584 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TTC39CQ8N584 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.15■□□□□ 0.82
TTC39CQ8N584 AC010947.1-201ENST00000623454 693 ntBASIC20.15■□□□□ 0.82
TTC39CQ8N584 AC092338.2-201ENST00000568827 1415 ntBASIC20.15■□□□□ 0.82
TTC39CQ8N584 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TTC39CQ8N584 KRT8P32-201ENST00000512863 1461 ntBASIC20.15■□□□□ 0.82
TTC39CQ8N584 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TTC39CQ8N584 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.15■□□□□ 0.82
TTC39CQ8N584 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TTC39CQ8N584 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.15■□□□□ 0.82
TTC39CQ8N584 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.15■□□□□ 0.82
TTC39CQ8N584 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.15■□□□□ 0.82
TTC39CQ8N584 AL512353.2-201ENST00000448759 1962 ntBASIC20.15■□□□□ 0.82
TTC39CQ8N584 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TTC39CQ8N584 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TTC39CQ8N584 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TTC39CQ8N584 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
TTC39CQ8N584 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TTC39CQ8N584 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TTC39CQ8N584 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
TTC39CQ8N584 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TTC39CQ8N584 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.14■□□□□ 0.81
TTC39CQ8N584 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TTC39CQ8N584 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TTC39CQ8N584 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.14■□□□□ 0.81
TTC39CQ8N584 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.14■□□□□ 0.81
TTC39CQ8N584 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TTC39CQ8N584 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
TTC39CQ8N584 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TTC39CQ8N584 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.14■□□□□ 0.81
TTC39CQ8N584 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.14■□□□□ 0.81
TTC39CQ8N584 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.14■□□□□ 0.81
TTC39CQ8N584 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TTC39CQ8N584 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
TTC39CQ8N584 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TTC39CQ8N584 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.14■□□□□ 0.81
TTC39CQ8N584 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.14■□□□□ 0.81
TTC39CQ8N584 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TTC39CQ8N584 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TTC39CQ8N584 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
TTC39CQ8N584 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TTC39CQ8N584 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TTC39CQ8N584 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.13■□□□□ 0.81
TTC39CQ8N584 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
TTC39CQ8N584 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
TTC39CQ8N584 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.13■□□□□ 0.81
TTC39CQ8N584 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TTC39CQ8N584 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TTC39CQ8N584 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TTC39CQ8N584 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TTC39CQ8N584 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TTC39CQ8N584 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TTC39CQ8N584 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TTC39CQ8N584 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.13■□□□□ 0.81
TTC39CQ8N584 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
TTC39CQ8N584 AC087499.1-201ENST00000418141 1075 ntBASIC20.13■□□□□ 0.81
TTC39CQ8N584 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.13■□□□□ 0.81
TTC39CQ8N584 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TTC39CQ8N584 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.13■□□□□ 0.81
TTC39CQ8N584 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.13■□□□□ 0.81
TTC39CQ8N584 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.13■□□□□ 0.81
TTC39CQ8N584 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.13■□□□□ 0.81
TTC39CQ8N584 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.13■□□□□ 0.81
TTC39CQ8N584 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TTC39CQ8N584 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
TTC39CQ8N584 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TTC39CQ8N584 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.13■□□□□ 0.81
TTC39CQ8N584 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TTC39CQ8N584 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms